Pairwise Alignments

Query, 473 a.a., PTS trehalose transporter subunit IIBC from Escherichia coli ECRC98

Subject, 480 a.a., PTS system trehalose-specific EIIBC component from Pseudomonas fluorescens SBW25-INTG

 Score =  367 bits (942), Expect = e-106
 Identities = 197/467 (42%), Positives = 285/467 (61%), Gaps = 13/467 (2%)

Query: 13  LIELVGGRGNIATVSHCITRLRFVLNQPANARPKEIEQLPMVKGCFTNAGQFQVVIGTN- 71
           ++E +GG  N+   +HC+TRLR  L  P+      + Q+ +VKG F   G FQVVIG   
Sbjct: 12  ILENLGGSDNLEQAAHCVTRLRLALKDPSLVNSSALNQVDLVKGSFFTGGLFQVVIGPGE 71

Query: 72  VGDYYQALIASTGQAQVDKEQVKKAARQNMKWHEQLISHFAEIFFPLLPALISGGLILGF 131
           V   Y AL   TG A      VKK         ++L+  F+++F P+LPALI  GL++G 
Sbjct: 72  VEKVYAALREQTGLAAATIADVKKKGADKTNAMQRLVRVFSDVFMPILPALIIAGLLMGV 131

Query: 132 RNVIGDLPMS-NGQTLAQMYPSLQTIYDFLWLIGEAIFFYLPVGICWSAVKKMGGTPILG 190
            N++G   M   G+TL + YP+L  ++  + L+    F +LP  + WSA K+ GG+ ILG
Sbjct: 132 NNLMGAKGMFIEGKTLLEAYPNLDGLWSLINLMANTSFVFLPALVGWSAAKRFGGSEILG 191

Query: 191 IVLGVTLVSPQLMNAY--------LLGQQLPEVWDFGMFSIAKVGYQAQVIPALLAGLAL 242
           IVLG+ LV P L+NA+        L GQ LP    FG F I KVGYQ Q++P L+A   +
Sbjct: 192 IVLGLMLVHPDLLNAWNYGKAVAGLDGQSLPYFDIFGWFQIEKVGYQGQILPILMAAYVM 251

Query: 243 GVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHALIGPFGRMIGDGVAFAVRHLMTGSFA 302
            VIE  L+  VP+ + L+VVP+ ++++   LA A+IGP  R +G  +   V  L     A
Sbjct: 252 SVIEKWLRARVPNAIQLLVVPITTIVVTGVLALAIIGPVTRHLGILITEGVVTLF--DLA 309

Query: 303 P-IGAALFGFLYAPLVITGVHQTTLAIDLQMIQSMGGTPVWPLIALSNIAQGSAVIGIII 361
           P +G A+FG LYAPLVITG+H   LA+DLQ+I + GGT +WP+I +SN+AQGSA + +  
Sbjct: 310 PMVGGAIFGLLYAPLVITGMHHMFLAVDLQLISTQGGTFIWPMIVMSNLAQGSAALAVFY 369

Query: 362 SSRKHNEREISVPAAISAWLGVTEPAMYGINLKYRFPMLCAMIGSGLAGLLCGLNGVMAN 421
           ++R   ++ ++  +AISA+ G+TEPAM+G+NL+++FP   A++GS L  +   LN V A+
Sbjct: 370 TTRNARDKSMASTSAISAYFGITEPAMFGVNLRFKFPFYAALVGSALGSIFLSLNKVQAS 429

Query: 422 GIGVGGLPGILSIQPSYWQVFALAMAIAIIIPIVLTSFIYQRKYRLG 468
            IGVGGLPG +SI P    VF + M IA+++P VLT  +  +  R G
Sbjct: 430 AIGVGGLPGFISIVPQSIAVFVIGMVIAMVVPFVLTCALSMKIVRPG 476