Pairwise Alignments

Query, 388 a.a., Na+/H+ antiporter NhaA from Escherichia coli ECRC98

Subject, 389 a.a., Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  464 bits (1195), Expect = e-135
 Identities = 232/379 (61%), Positives = 302/379 (79%), Gaps = 1/379 (0%)

Query: 2   KHLHRFFSSDASGGIILIIAAILAMMMANSGATSGWYHDFLETPVQLRVGSLEINKNMLL 61
           K +  F S +++GGI+L+IA   AM+MANS   +G+Y  FL T VQ+RVG+L+++K +LL
Sbjct: 3   KAIRNFLSQESAGGILLLIAVAFAMLMANS-PLAGFYQGFLGTEVQVRVGALDLHKPLLL 61

Query: 62  WINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPI 121
           WIND LMA+FFLL+GLEVKREL++G+L+S+ QA+ P  AAIGGM+VPA +YL FNY DPI
Sbjct: 62  WINDGLMALFFLLIGLEVKRELLEGALSSVAQASLPTFAAIGGMLVPAGIYLLFNYGDPI 121

Query: 122 TREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLSM 181
           T+ GWAIPAATDIAFALG++ALLGSRVP+ALK+FL+ALAIIDDLG I+IIALFY++DLS 
Sbjct: 122 TQAGWAIPAATDIAFALGIMALLGSRVPVALKVFLLALAIIDDLGVIVIIALFYSSDLST 181

Query: 182 ASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKE 241
            SL +A++AI  L  LN  GV     Y ++G++LW AVLKSGVHATLAGVI+ F IPL+ 
Sbjct: 182 VSLIIASIAIVGLVALNRKGVTSLAPYGVLGLILWVAVLKSGVHATLAGVIIAFCIPLRA 241

Query: 242 KHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKP 301
           K G SP++ LEH LHPW  +LILP+FAFANAGV+L  ++LD L S +P+GI  GL++GKP
Sbjct: 242 KDGSSPSEHLEHSLHPWSTFLILPVFAFANAGVALGNMSLDTLMSPVPVGIALGLMLGKP 301

Query: 302 LGISLFCWLALRLKLAHLPEGTTYQQIMAVGILCGIGFTMSIFIASLAFGSVDPELINWA 361
           +G+ LF ++A++LKLA LP+G  ++QI  V  +CGIGFTMS+FIASLAF   DP   + A
Sbjct: 302 IGVMLFSFVAVKLKLAQLPDGIGWKQIAPVAAMCGIGFTMSMFIASLAFEQADPMFGDLA 361

Query: 362 KLGILVGSISSAVIGYSWL 380
           +LG L+GSI +A+IGY WL
Sbjct: 362 RLGTLMGSIFAALIGYFWL 380