Pairwise Alignments

Query, 400 a.a., protein transport protein HofC from Escherichia coli ECRC98

Subject, 404 a.a., general secretion pathway protein F from Pseudomonas stutzeri RCH2

 Score =  178 bits (451), Expect = 3e-49
 Identities = 109/387 (28%), Positives = 191/387 (49%), Gaps = 10/387 (2%)

Query: 16  GNAQDGMLWAESRTLLLMALQQQMVTPLSLKRIAINSAQWRGDKS----------AEVIH 65
           G  Q G++ A+S       L+++   PL +K+        RG  S          A V  
Sbjct: 13  GREQKGLIEADSPRQARQLLREKQWAPLEVKQAKSKEDVSRGGFSFGRGLSARDLALVTR 72

Query: 66  QLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAHDLEQGIAFSNALLPWSEVFPPLY 125
           QLATL++A L + E L   A Q  S + +++L ++   + +G + + AL  +   FP LY
Sbjct: 73  QLATLVQAALPIEEALRAAAAQSTSAKIKSMLLAVRARVMEGHSLAAALREYPSAFPELY 132

Query: 126 QAMIRTGELTGKLDECCFELARQQRAQRQLTDKVKSALRYPIIILAMAIMVVVAMLHFVL 185
           +A +  GE  G L     +LA     ++Q   K++ AL YP+I++  ++ +VV +L +V+
Sbjct: 133 RATVAAGEHAGHLGLVLDQLADYTDQRQQSRQKIQLALLYPVILMVASLAIVVLLLGYVV 192

Query: 186 PEFAAIYKTFNTPLPALTQGIMTLADFSGEWGWLLVLFGIMLTIANKLLMRRPTWLIARQ 245
           P+   ++      LPALT+G++  +D    WGWL+VL  I   +A +  +R P   +   
Sbjct: 193 PDVVKVFVNTGQELPALTRGLIATSDVVKNWGWLIVLGIIAGVLAMRAALRDPALRLRWH 252

Query: 246 KLLLRIPIMGSLMRGQKLTQIFTILALTQSAGITFLQGVESVRETMRCPYWVQLLTQIQH 305
             +LRIP++G L R     +  + LA+   +G+  ++ +      +      + + +   
Sbjct: 253 AFILRIPLIGRLSRATNTARFASTLAILTKSGVPLVEALSIAAAVIANLRIRERVVEAAQ 312

Query: 306 DISNGHPIWLALKNAGEFSPLCLQLVRTGEASGSLDLMLDNIAHHHRDNTMALADNLAAL 365
            +  G  +  AL   GEF P+ L ++ +GE SG LD ML   A +  ++  A    L  L
Sbjct: 313 KVREGSSLTRALDATGEFPPMMLHMIASGEKSGELDQMLARTARNQENDLAAQVSLLVGL 372

Query: 366 LEPALLIITGGIIGTLVVAMYLPIFHL 392
            EP +L+  G ++  +V+A+ +PI  L
Sbjct: 373 FEPFMLVFMGAVVLVIVLAILMPILSL 399