Pairwise Alignments

Query, 400 a.a., protein transport protein HofC from Escherichia coli ECRC98

Subject, 409 a.a., type II secretory pathway, component PulF from Dechlorosoma suillum PS

 Score =  173 bits (438), Expect = 9e-48
 Identities = 119/401 (29%), Positives = 203/401 (50%), Gaps = 19/401 (4%)

Query: 9   WHGITGDGNAQDGMLWAESRTLLLMALQQQMVTPLSLK-------------RIAINSAQW 55
           + G +  G   +G L A S + +   L  Q +TPL +K              + + + + 
Sbjct: 6   YRGRSSGGGLVNGSLEAMSASAVADQLLLQGITPLEIKPAPKQEDGAGLKFNLTLFAEKV 65

Query: 56  RGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAHDLEQGIAFSNALL 115
           R         Q+ TLLKAG+ +   LA L E   +   + LLQ +   L+ G   S +L 
Sbjct: 66  RHVDVLLFSRQIYTLLKAGVPIMRALAGLQESSSNGAMKRLLQEVRESLDSGRELSASLA 125

Query: 116 PWSEVFPPLYQAMIRTGELTGKLDECCFELARQQRAQRQLTDKVKSALRYP-IIILAMAI 174
               VFPP Y +M+R GE+TG+L+E    L      ++ + ++VKSALRYP  ++ AMAI
Sbjct: 126 RHPTVFPPFYLSMVRVGEMTGRLEEIFLRLFYHLDFEQFMRNQVKSALRYPSFVVAAMAI 185

Query: 175 MVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFS-GEWGWLLV-LFGIMLTIANK 232
            +VV  + +V+P FA ++K FN  LP +T+ ++  +DF   +W +LL  L GI+      
Sbjct: 186 AIVVVNI-WVIPAFAQVFKGFNAELPFMTRLLINFSDFMVADWPYLLAGLVGIIFAFRAW 244

Query: 233 LLMRRPTWLIARQKLLLRIPIMGSLMRGQKLTQIFTILALTQSAGITFLQGVESVRETMR 292
           +      +L  R K  LR+PI G ++    L +     AL   +G+  +Q +  V +T+ 
Sbjct: 245 VATPMGRYLWDRTK--LRVPIAGKIVEKATLARFSRSFALAVRSGVPVVQAMSVVAQTVD 302

Query: 293 CPYWVQLLTQIQHDISNGHPIWLALKNAGEFSPLCLQLVRTGEASGSLDLMLDNIAHHHR 352
             +    + +++  +  G  +     +A  F+P+ LQ+V  GE SG+LD M++ +A  ++
Sbjct: 303 NVFIADKIEKMREGVERGESVLRTAISARVFTPIVLQMVAVGEESGALDDMMEEVADMYQ 362

Query: 353 DNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHLG 393
                   NL+  +EP L++  G ++  L + ++LPI+ LG
Sbjct: 363 REVEYELKNLSQQIEPILIVALGILVLVLALGIFLPIWDLG 403