Pairwise Alignments

Query, 461 a.a., type II secretion system protein GspE from Escherichia coli ECRC98

Subject, 572 a.a., type IV-A pilus assembly ATPase PilB from Dechlorosoma suillum PS

 Score =  309 bits (792), Expect = 1e-88
 Identities = 168/397 (42%), Positives = 249/397 (62%), Gaps = 23/397 (5%)

Query: 72  VAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGV 131
           V++     P  + + + L  A+   ASDIH EP +  YRIR RIDG L  + +       
Sbjct: 178 VSLDVDDAPVVKFIQKILLDAINDGASDIHFEPYEKFYRIRYRIDGELREVANPPLAIKE 237

Query: 132 ALTARLKVLGNLDIAEHRLPQDGQFTVELAGN-AVSFRIATLPCRGGEKMVLRLLQQVSQ 190
            + +R+KV+  +DI+E R+PQDG+  + L+   A+ FR++TLP   GEK+V+R+L   S 
Sbjct: 238 KVASRIKVISRMDISEKRVPQDGRMKLVLSKTRAIDFRVSTLPTLHGEKIVMRILDPSSA 297

Query: 191 ALDVNTLGMQPLQLAGFAHALQQPQGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVE 250
            L +  LG +P Q     +A+ +P G+VLVTGPTGSGKTV+LY+ L  LN   INI + E
Sbjct: 298 TLGIEALGYEPEQKEALLNAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNKPGINISTAE 357

Query: 251 DPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGH 310
           DP EI +AG+NQ  ++ +AGLTF   L++ LRQDPD+IM+GEIRD +TAEIAIKAAQTGH
Sbjct: 358 DPAEINLAGINQVNVNDKAGLTFSAALKSFLRQDPDIIMVGEIRDLDTAEIAIKAAQTGH 417

Query: 311 LVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPV 370
           +VLSTLHTN    TL RL+ MGV  + ++S++ L+ AQRL R+LC +C+     P+H+P 
Sbjct: 418 MVLSTLHTNDAPTTLERLKNMGVPTFNIASSVILITAQRLARRLC-NCK----VPLHVPT 472

Query: 371 NV--------------WPSPLPHWQAPGCVHCY-HGFYGRTALFEVLPITPVIRQLISAN 415
                           W    P+    GC  C   GF GR  +++V+P++  I+++I AN
Sbjct: 473 ETLLNAGFTEAELDGSWTLYGPN--PEGCERCKGGGFKGRVGIYQVMPVSEEIQRIIMAN 530

Query: 416 TDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELI 452
            +   +   A++ G++ L ++G L V+QG+T+ +E++
Sbjct: 531 GNSMDIAAQAKKEGVKDLRQSGLLKVKQGVTSLDEVL 567