Pairwise Alignments

Query, 426 a.a., Type VI secretion system protein Fha from Escherichia coli ECRC98

Subject, 432 a.a., type VI secretion system, FHA domain-containing protein from Marinobacter adhaerens HP15

 Score =  204 bits (520), Expect = 3e-57
 Identities = 152/438 (34%), Positives = 219/438 (50%), Gaps = 34/438 (7%)

Query: 9   LSLQVINGSELESGRAA-RCLFTQQGNVGHAPECHWSVQD-RQQSIPAQAFTVILHDGTF 66
           L L V N +    G     C   + G++G A    W +   R  ++P  A    L DG F
Sbjct: 3   LKLTVTNPTVAGGGATIDHCFSVRGGSIGTAASDTWRLSSHRTGAVPGHAEIRFL-DGGF 61

Query: 67  CLRPQTAQLWLNQA-KVTATSDLIQLRQGDEIQIGRLMVRVHL---------NRGDIPHY 116
           CL  ++ + ++N A +        +L  GD I IGR  +R  L          RG+    
Sbjct: 62  CLIDRSGRTYINSASQPVGRGRRARLNHGDTISIGRYQLRAELAEVVSEPLLERGEADQA 121

Query: 117 DEEMATPETIVTNRDMLTDTLLSTEGAPHYPGMTHRHQLADTVVNGFSADPLQALQSESL 176
            + +   E  +   + LT    + E   ++ G      ++D  +  ++  P Q       
Sbjct: 122 RQLIDVDEGPLMRAEYLTSQTENPEPLQNF-GAVAGEAVSDDPLAPWNLQPDQQKSDADA 180

Query: 177 ITTGDPLSGIAAVRPSAPLSDPASNGGINTPFMDLPPIYASPGDHNDDIS-------AAE 229
           +   +  S  AA R    +SD           M LP +     D   +IS        ++
Sbjct: 181 LMVSET-SWRAAERQ---VSDEYREN--RDVAMGLP-VRKGEKDRMSEISESADRREVSD 233

Query: 230 MAQRHLAVTPLLRGLGGSLTVSNSDDADDFLEEAGRTLQAAIKGLLDLQQ---QRNSLSD 286
            + +H++  PLLRG+   L  ++SD+   FLEE G+TL++ ++GLL L Q    R+    
Sbjct: 234 QSSKHISGAPLLRGMEVGLDFADSDEMRLFLEEVGQTLKSTVEGLLALHQGEDSRHQALR 293

Query: 287 KHLRPLEDNPLRLNMDYATALDVMFAEGKSPVHLAAPAAVSESLRNVRHHEEANRAAIVE 346
             L+P+EDNPLRL   Y   +  +FA  +SPVHL+APAAV ESL+++ HH++A R AI E
Sbjct: 294 TRLQPIEDNPLRLGEGYEDTVQTLFASHRSPVHLSAPAAVRESLQSLNHHQQATREAISE 353

Query: 347 SLRVLLDAFSPQNLLRRFVQYRRSHELRQPLDDA-GAWQMYSHYYEELASDRQQGFEMLF 405
           +L  +L AFSP+ LLRRF  YRR   LRQ  D+   AW MY HYY EL S RQQGFE LF
Sbjct: 354 ALEAILHAFSPEALLRRFHGYRRG--LRQNEDEGRWAWDMYQHYYRELKSSRQQGFERLF 411

Query: 406 NEVYAQVYDRVLREKQRE 423
            EV+ Q YD+ LR+ QRE
Sbjct: 412 QEVFEQAYDQNLRQLQRE 429