Pairwise Alignments

Query, 407 a.a., Acriflavin resistance protein B from Escherichia coli ECRC98

Subject, 1046 a.a., AcrB/AcrD/AcrF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  503 bits (1294), Expect = e-146
 Identities = 246/378 (65%), Positives = 313/378 (82%)

Query: 1   MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT 60
           M  FFIDRPIFAWVIAI++MLAG LAI  LPV+QYP IAPP V ISA+YPGA AKT++D+
Sbjct: 1   MARFFIDRPIFAWVIAILVMLAGVLAIKSLPVSQYPNIAPPTVVISANYPGASAKTLEDS 60

Query: 61  VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 120
           VTQVIEQ M G+DNL Y++S SD  G  +ITLTF +  DADIAQVQVQNKLQ AMPLLPQ
Sbjct: 61  VTQVIEQRMTGLDNLRYINSTSDGFGNAEITLTFNAEADADIAQVQVQNKLQSAMPLLPQ 120

Query: 121 EVQQQGVSIEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS 180
           EVQ QGV + KS+S FLMV+G ++ DG++T+ DI+DYV +N++D +SR +GVG++ LFG+
Sbjct: 121 EVQAQGVRVNKSTSGFLMVLGFVSEDGSLTKNDIADYVGSNVQDPLSRVAGVGEITLFGA 180

Query: 181 QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240
            YAMRIW++P +L ++ LT  DVI AI+ QNAQV+AGQLGG P V GQ+LNA++ AQ+RL
Sbjct: 181 PYAMRIWLDPLKLTQYSLTTQDVIAAIREQNAQVSAGQLGGAPAVLGQELNATVSAQSRL 240

Query: 241 TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL 300
            + E+F KI+LK + +G++V L DVA++ELG E+Y + + +NG+PA+GL I LATGANAL
Sbjct: 241 ETPEQFRKIILKSDTNGAKVFLGDVARVELGAESYVVESFYNGRPAAGLAISLATGANAL 300

Query: 301 DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 360
           DTA  +R ++A+M+PFFP+GL +VYPYDTTPFVK SI  VV TL+EA++LVF++MYLFLQ
Sbjct: 301 DTATRVREKIAEMKPFFPAGLDVVYPYDTTPFVKQSIEGVVHTLLEAVVLVFVIMYLFLQ 360

Query: 361 NFRATLIPTIAVPVVLLG 378
           NFRATLIPTIAVPVVLLG
Sbjct: 361 NFRATLIPTIAVPVVLLG 378



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 11/106 (10%)

Query: 278 IAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFP---SGLKIVYPYDTTPFVK 334
           +  FNG PA  +    A G +  D    I   + ++ P F    +GL     Y+     +
Sbjct: 814 LERFNGLPAMNIQGATAPGYSTGDAMKDIEKIVEQLPPGFGVEWNGLS----YEE----R 865

Query: 335 ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGHL 380
           +S ++       +I++VFLV+    +++       + VP+ ++G L
Sbjct: 866 LSGNQAPALYALSILVVFLVLAALYESWSVPFAVVLVVPLGIIGAL 911