Pairwise Alignments

Query, 407 a.a., Acriflavin resistance protein B from Escherichia coli ECRC98

Subject, 1049 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) from Shewanella loihica PV-4

 Score =  506 bits (1304), Expect = e-148
 Identities = 247/378 (65%), Positives = 314/378 (83%)

Query: 1   MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDT 60
           M  FFIDRPIFAWVIAII+MLAG L+I+KLPV+QYP+IAPP V I+A YPGA AKT++DT
Sbjct: 1   MARFFIDRPIFAWVIAIIVMLAGVLSIMKLPVSQYPSIAPPTVVINAIYPGASAKTMEDT 60

Query: 61  VTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 120
           VTQVIEQ M GID+L Y+SS SDS G  QITLTF +  D DIAQVQVQNKLQLAMPLLPQ
Sbjct: 61  VTQVIEQRMTGIDHLRYISSTSDSFGNAQITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ 120

Query: 121 EVQQQGVSIEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGS 180
           EVQ QGV + KSSS FLMV+G ++ DG++ + DISDYV +N+ D +SR  GVG++QLFG+
Sbjct: 121 EVQAQGVKVNKSSSGFLMVLGFVSQDGSLEKNDISDYVGSNILDPMSRVPGVGEIQLFGA 180

Query: 181 QYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240
           QYAMRIW++P +L ++ LT +D++ +I+ QNAQV+AGQLGG P + GQ+LNA++ AQ+RL
Sbjct: 181 QYAMRIWLDPLKLTQYNLTSLDIMASIREQNAQVSAGQLGGAPSIAGQELNATVTAQSRL 240

Query: 241 TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANAL 300
            + EEF KI++K +  G++V L DVA++ELG E+Y + + +NG+PA+GL IKLATGANAL
Sbjct: 241 QTAEEFRKIIIKSDPSGAKVYLEDVARVELGSESYSVESFYNGRPAAGLAIKLATGANAL 300

Query: 301 DTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 360
            TA  +R ++ +M+PFFP GL++VYPYDTTPFV+ SI  VV TL+EA++LVF++MYLFLQ
Sbjct: 301 ATAERVREKVDEMKPFFPQGLEVVYPYDTTPFVEKSIEGVVHTLLEAVVLVFVIMYLFLQ 360

Query: 361 NFRATLIPTIAVPVVLLG 378
           NFRATLIPTIAVPVVLLG
Sbjct: 361 NFRATLIPTIAVPVVLLG 378



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 11/106 (10%)

Query: 278 IAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFP---SGLKIVYPYDTTPFVK 334
           +  FNG PA  +    A G +     A I A +AK+ P F    +GL     Y+     +
Sbjct: 814 LERFNGLPAMNIQGGTAQGYSTGAAMADIEAMVAKLPPGFGVEWNGLS----YEE----R 865

Query: 335 ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGHL 380
           +S ++       +I++VFLV+    +++       + VP+ ++G L
Sbjct: 866 LSGNQAPALYALSIMVVFLVLAALYESWSVPFAVILVVPLGIIGAL 911