Pairwise Alignments

Query, 397 a.a., multidrug efflux RND transporter periplasmic adaptor subunit AcrA from Escherichia coli ECRC98

Subject, 417 a.a., multidrug resistance protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  375 bits (962), Expect = e-108
 Identities = 201/386 (52%), Positives = 263/386 (68%), Gaps = 3/386 (0%)

Query: 8   TPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRTSAYRIAE 67
           T L V++ML   LA  GC+ +Q   G    P V  V V+  P+ +TTELPGR SA  ++E
Sbjct: 8   TLLIVLVMLVAVLA--GCNQEQRATGPAPEPEVATVVVRPRPVTLTTELPGRISALLVSE 65

Query: 68  VRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVN 127
           VRPQV GII KR F+EG+D++AG  LYQIDPA Y+A +DSA   LA+A+AA   A+L   
Sbjct: 66  VRPQVGGIIQKRLFREGADVKAGDVLYQIDPAVYRAAHDSALASLARAEAALEPARLKAG 125

Query: 128 RYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKS 187
           RY  L+    +SKQ+ D A A   QA A V AA+AAV+ ARI+L YT+VT+P+SGRIG+S
Sbjct: 126 RYADLVKVNGVSKQDNDDAQAAYGQAKAEVAAARAAVQKARIDLEYTRVTAPVSGRIGRS 185

Query: 188 NVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGK-AKVSL 246
           +VT GALV   QAT LATVQQ DP+YVDVTQS+ D LRL++ LA+G L++     AKV L
Sbjct: 186 SVTPGALVTANQATPLATVQQTDPVYVDVTQSTGDLLRLRRALADGKLRKAGADGAKVKL 245

Query: 247 ITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAI 306
           +  DG  + Q+G L+FSD+TVD  T  +TLRA+FPNP   LLPG++VRA LEEG+N +AI
Sbjct: 246 LFEDGTTYAQEGALQFSDITVDPGTSVVTLRALFPNPRRDLLPGLYVRAVLEEGVNEHAI 305

Query: 307 LVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQK 366
           LVPQ  VTR  +G+  V++V A + VE R I   + +G  WLV +GL  GDRV++ GLQK
Sbjct: 306 LVPQAAVTRDSKGNPVVMLVSAGNTVERRSIRVERVVGSDWLVGDGLAEGDRVIVEGLQK 365

Query: 367 VRPGVQVKAQEVTADNNQQAASGAQP 392
           +RPG +V+  +  +     AAS   P
Sbjct: 366 IRPGAKVRVVDAGSPPASAAASATAP 391