Pairwise Alignments

Query, 415 a.a., mechanosensitive ion channel YbdG from Escherichia coli ECRC98

Subject, 416 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  347 bits (889), Expect = e-100
 Identities = 181/395 (45%), Positives = 259/395 (65%), Gaps = 1/395 (0%)

Query: 17  DHTTSMVMIFGIIFLTAVVVHIILHWVVLRTFEKRAIASSRLWLQIITQNKLFHRLAFTL 76
           D  ++ VM+F  + L A + ++++   V+ T       S   W  I  Q+++  +LA  +
Sbjct: 23  DGVSTGVMVFACL-LIAFIGYVVVKRGVVSTMNIVIQRSKVRWDDIFMQHRVLEKLAKLV 81

Query: 77  QGIIVNIQAVFWLQKGTEAADILTTCAQLWIMMYALLSVFSLLDVILNLAQKFPAASQLP 136
             +I+NI     L +    + +      + I++  + +V+S+LD    +A     + +LP
Sbjct: 82  PALILNILLPLALVEHPLLSSLADRLLDVAIVILFVRAVYSVLDAGNEIADVNQISRRLP 141

Query: 137 LKGIFQGIKLIGAILVGILMISLLIGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQL 196
           +K   Q +KL    +  ++ IS+L  QSP   +SGLG    ++MLVFKD ILG VAGIQL
Sbjct: 142 IKSFVQLLKLFMFFVAIVISISVLAEQSPVYFLSGLGVATGLVMLVFKDTILGFVAGIQL 201

Query: 197 SANDMLKLGDWLEMPKYGADGAVIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMS 256
           +AN M+  GDW++M KYGADGAV ++ LTTVKV+NWD TIT IP ++LVSD+FKNW GMS
Sbjct: 202 AANRMVSPGDWIQMDKYGADGAVEEVSLTTVKVQNWDKTITMIPAYALVSDAFKNWRGMS 261

Query: 257 ASGGRRIKRSISIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESVL 316
            SGGRRIKR+++ID+ SI FL +++++RL K +LLK YL  +  EI E+N +    +  +
Sbjct: 262 ESGGRRIKRAVNIDIDSIAFLSDEQLKRLGKINLLKEYLARKEVEIAEFNAKIQDGDMPV 321

Query: 317 NLRRMTNIGTFRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYE 376
           N R +TN+GTFRAYL EY+R HP++ ++MTL+VRQLAP   GLP+EIY FTN   W  YE
Sbjct: 322 NSRNLTNVGTFRAYLLEYMRKHPKVHQEMTLLVRQLAPTTEGLPIEIYIFTNDTRWAFYE 381

Query: 377 SIQADIFDHIFAIVEEFGLRLHQSPTGNDIRSLAG 411
            IQADIFDHI+AI+ +F LR  Q+PTG D+RSL G
Sbjct: 382 DIQADIFDHIYAILPQFNLRAFQAPTGADVRSLKG 416