Pairwise Alignments

Query, 377 a.a., putative multidrug ABC transporter permease YbhS from Escherichia coli ECRC98

Subject, 1171 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  309 bits (791), Expect = 3e-88
 Identities = 171/390 (43%), Positives = 248/390 (63%), Gaps = 31/390 (7%)

Query: 10   RVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALD 69
            R+R L VKE  QIVRDPSS  IA+V+P++LL +FGYG++LD+  + V ++L++RS+ A  
Sbjct: 791  RMRGLLVKEALQIVRDPSSIAIALVMPVVLLLLFGYGVSLDARNIPVAVVLDERSDEAES 850

Query: 70   FTH------TMTGSPYIDAT--ISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATA 121
                     T  G+ Y DA   + D RQ         ++  +V +P  FA  ++ A  T 
Sbjct: 851  LAARFLSGTTFKGAVYRDAAAALEDFRQR--------RVEAMVRVPEGFARGLQ-AGGTP 901

Query: 122  PIQVITDGSEPNTANFVQGYVEGIWQIWQMQRA------------EDNGQTFE--PLIDV 167
             +Q++ +G + N A  V GYV G WQ W   RA            +D+G      P ++V
Sbjct: 902  VVQLVVNGVDANRARLVMGYVNGAWQGWLASRATGRPGYPSMVTMQDDGTPLRGGPPVNV 961

Query: 168  QTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELL 227
              R WFNP A S+++++PG V ++MT+IG +LT+LV+AREWERGTMEALL T +   ELL
Sbjct: 962  SARVWFNPEAESRNYLVPGLVVLVMTLIGTLLTALVMAREWERGTMEALLVTPVRIGELL 1021

Query: 228  LCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITR 287
            + KL+PY+ LGM  M LC  +++++  VP RGS L+L  ++SLFLL+ LGMGLLIS + R
Sbjct: 1022 VGKLLPYFVLGMAGMGLCTSLALWLFDVPLRGSALVLLGMASLFLLAALGMGLLISVLAR 1081

Query: 288  NQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIP 347
            NQF A Q A+  AFLP+  LSGFIF + + PA IRAV+++I ARYF S+L+++FLAG++ 
Sbjct: 1082 NQFVAGQAAILVAFLPAFFLSGFIFDLAAAPAPIRAVSHLIAARYFASSLKTIFLAGDVT 1141

Query: 348  VVLVVNVLFLIASAVMFIGLTWLKTKRRLD 377
             VL+ + L L   A + +GL   +  +RL+
Sbjct: 1142 AVLLPDALALAILATVLLGLARRRMHKRLE 1171