Pairwise Alignments

Query, 377 a.a., putative multidrug ABC transporter permease YbhS from Escherichia coli ECRC98

Subject, 373 a.a., ABC-2 type transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  154 bits (390), Expect = 3e-42
 Identities = 111/389 (28%), Positives = 197/389 (50%), Gaps = 38/389 (9%)

Query: 9   RRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGIL--------- 59
           RR+ A+ VKE RQ+ RD  ++ + V+IPL+ L +FGY IN D+  L  G++         
Sbjct: 3   RRIWAVVVKELRQLSRDRMTFGMIVMIPLVQLMLFGYAINTDARHLPAGLVNLSDSAYSR 62

Query: 60  -LEQRSEAA--LDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMER 116
            L +  EA   +DF H    +   DA I+            G+++ ++ +  D  E++ R
Sbjct: 63  ALVKAVEATQVVDFKHRYLSAAEADAAIT-----------RGEVKAVLYLGADLDERLVR 111

Query: 117 ANATA-------PI-QVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQ 168
             A A       P+ Q + DGS+   A+ ++   +        +  + N  +FE +    
Sbjct: 112 HPAFAGQAYFAEPVGQWLVDGSDTVVASTIRSLRQMPLDEIAGRAVKSNPPSFEVV---- 167

Query: 169 TRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLL 228
              +FNP   S   I+PG + +I+T+   + TS  + RE E+G ME L++T +   EL+L
Sbjct: 168 --QYFNPEQRSVVNIVPGLLGVILTMTMVMFTSAAIVREREQGNMEFLITTPVRPLELML 225

Query: 229 CKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRN 288
            K+ PY  +G + + + +     +  VP RG L  +   + LF+ ++L +GL+ISTI + 
Sbjct: 226 GKITPYVLVGFVQLAIILSAGHLLFAVPIRGGLDSIALAAMLFICASLTLGLVISTIAKT 285

Query: 289 QFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPV 348
           Q  + Q+ +    LPSI+LSGF+F  ++MP   + +   +PA +F+   +++ L      
Sbjct: 286 QLQSMQMTV-FILLPSILLSGFMFPYEAMPVAAQWIAEALPATHFMRMSRAIVLRDAEVS 344

Query: 349 VLVVNVLFLIASAVMFIGLTWLKTKRRLD 377
            L  + L++I    + + +  L+  +RLD
Sbjct: 345 DLQFDALWMIGFTCLGLLVASLRFSKRLD 373