Pairwise Alignments

Query, 306 a.a., L,D-transpeptidase from Escherichia coli ECRC98

Subject, 304 a.a., ErfK/YbiS/YcfS/YnhG (RefSeq) from Shewanella amazonensis SB2B

 Score =  383 bits (984), Expect = e-111
 Identities = 184/294 (62%), Positives = 224/294 (76%), Gaps = 1/294 (0%)

Query: 13  FAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQMGLSNMMEANP 72
           F+++ FC +A AV YPLP   SRLVG+NQ   +P+ + + LE  AA++Q+GLSN+MEANP
Sbjct: 11  FSLISFCQSALAVIYPLPAKDSRLVGENQYYVVPD-DKRTLEDIAAQFQLGLSNLMEANP 69

Query: 73  GVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGK 132
           GVD FLPK G+ L IP QLILPD   EGIVIN AEMRLYYYPKG   V VLPIGIGQ+G+
Sbjct: 70  GVDPFLPKPGSTLIIPHQLILPDAPREGIVINIAEMRLYYYPKGKKIVEVLPIGIGQVGR 129

Query: 133 DTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYA 192
           DTP NW T V+RK+A PTWTPTA++  EY A G  LP V PAGPDNPMGL+ALYIG LYA
Sbjct: 130 DTPENWVTTVQRKRANPTWTPTARIRKEYAAKGVTLPPVWPAGPDNPMGLFALYIGNLYA 189

Query: 193 IHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEV 252
           IHGTNA FGIGLRVS GCVRLR+ DI+ LF  VPVGTRVQF+++P+KAT EPDG+RY+EV
Sbjct: 190 IHGTNATFGIGLRVSQGCVRLRDTDIEHLFNSVPVGTRVQFVNQPIKATEEPDGARYLEV 249

Query: 253 HNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMPVRLN 306
           H PLS T+A+F+  E VP+TL  ++       + D  VL   ++ R+GMP R+N
Sbjct: 250 HQPLSRTQAEFDSAEPVPLTLPTAISRFVAHAETDSFVLKRLLEARTGMPTRIN 303