Pairwise Alignments

Query, 306 a.a., L,D-transpeptidase from Escherichia coli ECRC98

Subject, 304 a.a., ErfK/YbiS/YcfS/YnhG family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  373 bits (958), Expect = e-108
 Identities = 183/286 (63%), Positives = 219/286 (76%), Gaps = 1/286 (0%)

Query: 21  TASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPK 80
           +A A  YPLP+  SRLVG+N   T+PEG    LE  AA++Q+GLSN++EANPGVD FLP 
Sbjct: 19  SALATEYPLPSSKSRLVGENLYYTVPEGK-HTLEDIAAKFQLGLSNLLEANPGVDPFLPT 77

Query: 81  GGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTT 140
            G+ L IPQQLILP+   EGIVIN AEMRLYYYPKG NTV VLPIGIGQ+GKDTP NW T
Sbjct: 78  PGSKLLIPQQLILPNAPREGIVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVT 137

Query: 141 KVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANF 200
            V+RK+A PTWTPT ++  EY A GE LPAV PAGPDNPMGLYALYIG LYAIHGTNA+F
Sbjct: 138 SVQRKRANPTWTPTPRIRKEYAARGEILPAVWPAGPDNPMGLYALYIGNLYAIHGTNASF 197

Query: 201 GIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTE 260
           GIGLRVS GCVRLR++DI+ LF+ VPVGTRVQF+++P+KAT EPDG RY+ VH PLS T 
Sbjct: 198 GIGLRVSQGCVRLRHDDIEHLFKTVPVGTRVQFVNQPIKATEEPDGKRYLAVHQPLSRTI 257

Query: 261 AQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMPVRLN 306
           A+FE  E V +TL K +     + D D  V+ + +  R+G+P  +N
Sbjct: 258 AEFESAEPVSLTLPKEIAKFIAKADTDSAVIKKLLDERTGVPTIIN 303