Pairwise Alignments

Query, 511 a.a., murein biosynthesis integral membrane protein MurJ from Escherichia coli ECRC98

Subject, 516 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  505 bits (1300), Expect = e-147
 Identities = 274/517 (52%), Positives = 353/517 (68%), Gaps = 11/517 (2%)

Query: 1   MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVAFKLPNLLRRIFAEGAF 60
           MNL ++L  VS  T+ SRV G AR+ ++AR FGA   TDAF+VAF++PNLLRRI AEGAF
Sbjct: 1   MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAF 60

Query: 61  SQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAGMLAAPWVIMVTAPGFADT 120
           SQAFVPILAE+K+ QG DAT+  V   S +L  ALA++++ G++ A  V+ + A G A  
Sbjct: 61  SQAFVPILAEFKNSQGHDATKALVDATSTVLAWALAILSLIGVVGASGVVFIVASGLAHE 120

Query: 121 ADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIPAFAPTLLNISMIGFALFAAP 180
              +AL   + +I FPYI+ ISL SL   +LNT+  FS+PAFAP LLN++ I  A+F AP
Sbjct: 121 GQAYALAVTMTRIMFPYIIFISLTSLASGVLNTYKNFSLPAFAPVLLNVAFIVAAVFVAP 180

Query: 181 YFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFHDA------GAMRVVKQMG 234
               PV +LAWAV  GGVLQ + QLP LKKI M+  PRI  +        G  RV+ +M 
Sbjct: 181 RLQTPVYSLAWAVIAGGVLQFLVQLPGLKKIDMI--PRIGLNPVKALAHRGVKRVLSKMV 238

Query: 235 PAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPSGVLGVALGTILLPSLSKS 294
           PA+  VSV+QISLIINT  AS +  G+VSW+ YADRLMEFP+ +LGVALGTILLPSLSK+
Sbjct: 239 PAMFAVSVAQISLIINTNIASRIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKA 298

Query: 295 FASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRAL 354
               +  EY+ L+DWGLR+ FLLA PSAVAL   + PLT +LF YGKF     +M  RAL
Sbjct: 299 HVDADPHEYSSLLDWGLRVTFLLAAPSAVALFFFAQPLTATLFHYGKFDGNSVVMVARAL 358

Query: 355 IAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSI 414
            AY VGLIGLI++K+LAPGFY++QDIKTPVKI +  LILTQL N  F+    HAGL+LS+
Sbjct: 359 SAYGVGLIGLILIKILAPGFYAKQDIKTPVKIGVGVLILTQLSNYLFVPIFAHAGLTLSV 418

Query: 415 GLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVVAVLVMSGVLLGMLHIMPEW-SLGT 473
           GL AC NA LL+  LRK+ I+TP  GW+ F ++L  A LV++G  +  L I  +W  + +
Sbjct: 419 GLGACGNALLLFLGLRKRGIYTPSSGWLKFFVQLFGACLVLAGT-MHWLAISFDWIGMHS 477

Query: 474 MPW-RLLRLMAVVLAGIAAYFAALAVLGFKVKEFARR 509
            P  R++ L A ++   A YF  L ++GFK   F RR
Sbjct: 478 RPVDRMVLLAACLVLFAALYFGMLWLMGFKYAYFKRR 514