Pairwise Alignments

Query, 317 a.a., flagellar hook-associated protein FlgL from Escherichia coli ECRC98

Subject, 397 a.a., flagellar hook-associated protein 3 from Vibrio cholerae E7946 ATCC 55056

 Score = 85.1 bits (209), Expect = 3e-21
 Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 3/185 (1%)

Query: 2   RFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPIAASQAVVLSQAQAQNSQ 61
           R S+   YQ     I   +++      Q+++GK++++ SD+P+A      + Q + Q  Q
Sbjct: 4   RISSFHNYQAVQNDIRRQESKVFNNQAQLASGKKLLSASDNPLATHYIQNVGQQEEQLRQ 63

Query: 62  YTLARTFATQKVSLEESVLSQVTTAIQNAQEKIVYASNGTLSDNDRASLATDIQGLRDQL 121
           Y  A      ++  +E ++S       +A+  ++   NG+LS  DR + A  +Q + +  
Sbjct: 64  YLDAIVLVRNRLEHQEVIISNTEEFSDSAKRTVMEMINGSLSPEDRVARARVLQEMANNF 123

Query: 122 LNLANTTDGNGRYIFAGYKTETAPF---SEVNGDYVGGTESIKQQVDASRSMVIGHTGDK 178
           +NLAN  D +G YIFAG K +  PF   ++ N  Y G     K ++  S  +   + G K
Sbjct: 124 INLANVQDESGNYIFAGTKPKNQPFFRDNQGNVTYAGDDYQRKMKISNSLEIPFNNPGSK 183

Query: 179 IFDSI 183
           +F  I
Sbjct: 184 VFMEI 188



 Score = 34.3 bits (77), Expect = 5e-06
 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 201 FAMLDSAIAALKTPVADSEADKETAAAALDKTNRGLKNSLNNVLTVRAELGTQLNELESL 260
           F++ D+   A++   A+      +  A L +       +  ++   R ++G +L+ L+  
Sbjct: 284 FSVFDTFRDAIR--YAEGSVSDASNTAKLHQLVEEFHTAFIHLNKTRTDIGARLSTLDIQ 341

Query: 261 DSLGSDRALGQTQQMSDLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLF 313
           +    D  +   +  S   D+D+   +  +     AL+AS KAF   + L+LF
Sbjct: 342 EEQHEDFKISLAKSKSTFEDLDYAEAVIEFNENSRALEASQKAFGKTKDLTLF 394