Pairwise Alignments

Query, 296 a.a., peptide ABC transporter permease SapC from Escherichia coli ECRC98

Subject, 296 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  292 bits (748), Expect = 5e-84
 Identities = 145/291 (49%), Positives = 194/291 (66%)

Query: 1   MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCMFGGWFAPYGIDQQFLG 60
           MP   +Y E   P  L   W  F  +  A  GL+    L +L +FG   APY  + Q   
Sbjct: 1   MPQIKIYQEDHIPSPLSRIWSAFTDNPFAFAGLWAVCCLLLLALFGPLIAPYSPEHQDPL 60

Query: 61  YQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLVLGTFA 120
             LL PSW   G V  FLGTDDLGRD+ SRLL GA  T G A  + + A + G ++G+ +
Sbjct: 61  ALLLAPSWEPTGTVEHFLGTDDLGRDIFSRLLHGAHLTFGMALAIVITALLLGFIIGSIS 120

Query: 121 GATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSHAMFAVWLALLPRMVRSIYSM 180
           G   GL+S++L+H+LD LL+IPSLL+AI+VVA  GP L +  +AV +AL P+ VR+I+  
Sbjct: 121 GMMKGLKSSILSHLLDALLSIPSLLMAILVVAVTGPGLGNVFWAVGIALTPQFVRAIHQA 180

Query: 181 VHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVTEITRALSMAILDIAALGFLDLG 240
           VH+EL+KEYV AARLDGA++L I W+ ++PNI   ++ + T  +S AILDIAALGFL+LG
Sbjct: 181 VHEELQKEYVTAARLDGANSLQIFWYVILPNIMDTMIIQTTLGISAAILDIAALGFLNLG 240

Query: 241 AQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMISVLLVNLLGDGVRRAI 291
           AQ PSPEWGAM+   L+ +  APWTV +PG AI+ SVL +NL+GDG+R A+
Sbjct: 241 AQAPSPEWGAMVSQGLDNLLTAPWTVTIPGVAILCSVLAINLVGDGLRSAL 291