Pairwise Alignments

Query, 413 a.a., oxygen-sensing cyclic-di-GMP phosphodiesterase from Escherichia coli ECRC98

Subject, 1141 a.a., putative integral membrane sensor protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 72.8 bits (177), Expect = 5e-17
 Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 13/248 (5%)

Query: 18  LEQNMMGAVLINENDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNR 77
           +E  + G V I+ +  +   N A EKL G++ +E+IG N+ +L+P      H  Y+    
Sbjct: 277 METAIDGIVTIDSHGIITDVNQATEKLLGWRADELIGQNVKILMPDPFHSEHDGYLARYL 336

Query: 78  EGGKARVEGMSRELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRD----ASVEMAQKE 133
             G+AR+ G  RE++   K+G KI  R  +  V      +++A + D     S+EMA +E
Sbjct: 337 ATGEARIIGKGREVEAIHKNGHKIAIRLGIGHVKMAEDDFFVAFISDIRQRLSMEMALRE 396

Query: 134 QTRQLIIAVDHLDRPVIVL----DPERHIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189
             ++    + ++  P I      D +  ++  + A  ++ GY  S+   M P    +  +
Sbjct: 397 NEQKFRSLIGNI--PGIAYRCKNDEQWSMIFISNAVEKITGYPASDF--MLPSPKRSFSD 452

Query: 190 -FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDI 248
            F  D+   +   +        E+ +L R G+  W+    + V D  +    L     DI
Sbjct: 453 LFHPDDLEHINNAVPPVGAFNLEYRILHRNGDIRWMMEYGNHVRDQQSGEMYLDGFIMDI 512

Query: 249 TEERQIRQ 256
           TE RQ+ Q
Sbjct: 513 TERRQMEQ 520