Pairwise Alignments

Query, 334 a.a., L,D-transpeptidase LdtE from Escherichia coli ECRC98

Subject, 304 a.a., ErfK/YbiS/YcfS/YnhG (RefSeq) from Shewanella amazonensis SB2B

 Score =  268 bits (685), Expect = 1e-76
 Identities = 138/292 (47%), Positives = 195/292 (66%), Gaps = 7/292 (2%)

Query: 16  SAIQAAWAVDYPLPPTGSRLVGQNQTYTVQEGDKNLQAIARRFDTAAMLILEANNTIAP- 74
           S  Q+A AV YPLP   SRLVG+NQ Y V +  + L+ IA +F      ++EAN  + P 
Sbjct: 15  SFCQSALAVIYPLPAKDSRLVGENQYYVVPDDKRTLEDIAAQFQLGLSNLMEANPGVDPF 74

Query: 75  VPKPGTTITIPSQLLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPV- 133
           +PKPG+T+ IP QL+LPDAPR+GI++N+AE+RLYYYP G+ IV+V PIGIG  G +TP  
Sbjct: 75  LPKPGSTLIIPHQLILPDAPREGIVINIAEMRLYYYPKGKKIVEVLPIGIGQVGRDTPEN 134

Query: 134 METRVGQKIPNPTWTPTAGIRQRSLERGIKLPPVVPAGPNNPLGRYALRLAHGNGEYLIH 193
             T V +K  NPTWTPTA IR+    +G+ LPPV PAGP+NP+G +AL + +    Y IH
Sbjct: 135 WVTTVQRKRANPTWTPTARIRKEYAAKGVTLPPVWPAGPDNPMGLFALYIGN---LYAIH 191

Query: 194 GTSAPDSVGLRVSSGCIRMNAPDIKALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHR 253
           GT+A   +GLRVS GC+R+   DI+ LF+SV  GT V+ +N+P+K + EP+G RY+EVH+
Sbjct: 192 GTNATFGIGLRVSQGCVRLRDTDIEHLFNSVPVGTRVQFVNQPIKATEEPDGARYLEVHQ 251

Query: 254 PLSAEEQQ--NVQTMPYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVAVS 303
           PLS  + +  + + +P TLP   ++F  +   D  ++ + L  R G P  ++
Sbjct: 252 PLSRTQAEFDSAEPVPLTLPTAISRFVAHAETDSFVLKRLLEARTGMPTRIN 303