Pairwise Alignments

Query, 269 a.a., 23S rRNA (guanine(745)-N(1))-methyltransferase from Escherichia coli ECRC98

Subject, 270 a.a., 23S rRNA methyltransferase A (RefSeq) from Shewanella loihica PV-4

 Score =  219 bits (559), Expect = 4e-62
 Identities = 116/270 (42%), Positives = 165/270 (61%), Gaps = 6/270 (2%)

Query: 1   MSFSCPLCHQPLTREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRA 60
           M++ CP+C + L+    ++ C   H+FD AKEGYVNLLPVQ KRS+DPGD+ EMM ARR 
Sbjct: 1   MNYLCPICQRTLSLIDRTWCCEANHRFDCAKEGYVNLLPVQKKRSKDPGDNKEMMFARRE 60

Query: 61  FLDAGHYQPLRDAIVAQLRERLNEKATAVLDIGCGEGYYTHAFADALPEITTF---GLDV 117
           FL+ G+Y+ + D + A  +E   E A   LDIGCGEGYY+H    A+    +F   GLD+
Sbjct: 61  FLNKGYYEAMSDRVNALAQEYAGE-ARHGLDIGCGEGYYSHRLLQAMGSAESFSLSGLDI 119

Query: 118 SKVAIKAAAKRYPQVTLCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITA 177
           SK A+K AAKRYP +  CVASS  +PF+D S D ++RIYAP + +EL RV KPG  +IT 
Sbjct: 120 SKSALKYAAKRYPDIQFCVASSFEMPFADQSFDFMLRIYAPSQDDELRRVAKPGAILITV 179

Query: 178 TPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQKSDELCYPMRLRGDEAVA-LLQMTPF 236
           + GP+H   LK +IY++   +     Q+ GF    S+ L   M +     +   L MTP+
Sbjct: 180 SAGPQHHFALKQVIYDQPRPNPEVDSQIVGFERLHSERLTQSMTISDSADIGHFLAMTPY 239

Query: 237 AWRAKPEVWQILAAKEVFDCQTDFNIHLWQ 266
            W+       +L +K +  C+ DF + +++
Sbjct: 240 NWKFTDAQRALLTSKPL-TCELDFKLEVFR 268