Pairwise Alignments

Query, 269 a.a., 23S rRNA (guanine(745)-N(1))-methyltransferase from Escherichia coli ECRC98

Subject, 271 a.a., 23S rRNA methyltransferase A (RefSeq) from Shewanella sp. ANA-3

 Score =  228 bits (582), Expect = 8e-65
 Identities = 124/268 (46%), Positives = 162/268 (60%), Gaps = 6/268 (2%)

Query: 1   MSFSCPLCHQPLTREKNSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEMMQARRA 60
           M + CPLC  PLT  + ++ CPQ H+FDMAKEGYVNLLPVQ K S+DPGD+ +MM ARR 
Sbjct: 1   MQYICPLCALPLTLTERTWGCPQAHKFDMAKEGYVNLLPVQKKNSKDPGDNQQMMLARRE 60

Query: 61  FLDAGHYQPLRDAIVAQLRERLNEKATAVLDIGCGEGYYTHAFADAL---PEITTFGLDV 117
           FL AG+YQ L D  V +L      +A  +LDIGCGEGYY+H   + L         G+D+
Sbjct: 61  FLTAGYYQSLSDR-VNELALAYASEARQILDIGCGEGYYSHRLYNTLVAEHPCQLKGVDI 119

Query: 118 SKVAIKAAAKRYPQVTLCVASSHRLPFSDTSMDAIIRIYAPCKAEELARVVKPGGWVITA 177
           SK AIK AAKRYP ++ CVAS++ +P    S+D  IRIYAP K EEL RV+ P G +IT 
Sbjct: 120 SKSAIKYAAKRYPNLSFCVASAYEMPIPSHSIDLAIRIYAPSKVEELQRVMAPNGILITV 179

Query: 178 TPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQKSDELCYPMRLRGDEAVA-LLQMTPF 236
           +PGP H   LK  IY E  LH     ++ GF     + L   + L   + ++  L+MTP+
Sbjct: 180 SPGPLHHFALKQQIYAEPRLHPASDAKIAGFECLYQERLRSQLELNNSQDISHFLEMTPY 239

Query: 237 AWRAKPEVWQILAAKEVFDCQTDFNIHL 264
           AW+   E      A+    C+ DF I +
Sbjct: 240 AWKFTAEQKHTF-AQSGLSCELDFQIEV 266