Pairwise Alignments

Query, 289 a.a., DNA-binding transcriptional regulator HexR from Escherichia coli ECRC98

Subject, 284 a.a., DNA-binding transcriptional regulator HexR (RefSeq) from Shewanella loihica PV-4

 Score =  419 bits (1078), Expect = e-122
 Identities = 206/281 (73%), Positives = 246/281 (87%)

Query: 1   MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAALALEANVSEPTVNRFCRSMDT 60
           MN LEK+Q  L H SKSERKVAEVILASP  AIHSSIA LA  A+VSEPTVNRFCR +DT
Sbjct: 1   MNTLEKVQKNLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60

Query: 61  RGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKSAINR 120
           +GFPDFKLHLAQSLANGTPYV+R+V EDDS +SYT KIFES+MA LD  R S+D +AIN+
Sbjct: 61  KGFPDFKLHLAQSLANGTPYVSRHVEEDDSPDSYTTKIFESSMAALDTARQSMDTAAINK 120

Query: 121 AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVV 180
           AVD+LTQAKKI+FFGLG+SA+VAHDA NKFFRFNVPV+  DD+++QRMSC+N S+GDVVV
Sbjct: 121 AVDILTQAKKISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSSEGDVVV 180

Query: 181 LISHTGRTKNLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR 240
           LISHTGRTK+L+++A+LAREN A VIA+TS  +PL+ E TL +T++VPEDTD+Y+PM SR
Sbjct: 181 LISHTGRTKSLIDIARLARENGAAVIAITSRNSPLSAECTLPVTMEVPEDTDMYLPMASR 240

Query: 241 LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKQ 281
           LAQL ++DVLATGFTLRRG +FR++LKRVKE LKESR DK+
Sbjct: 241 LAQLVIVDVLATGFTLRRGPRFRESLKRVKEVLKESRIDKE 281