Pairwise Alignments

Query, 504 a.a., arabinose ABC transporter ATP-binding protein AraG from Escherichia coli ECRC98

Subject, 519 a.a., L-arabinose ABC transporter ATP-binding protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  514 bits (1325), Expect = e-150
 Identities = 265/497 (53%), Positives = 351/497 (70%), Gaps = 1/497 (0%)

Query: 8   LSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVIN 67
           L F  IGK FPGV+AL  +SFD   GQVH LMGENGAGKSTLLKIL G Y P +G V+I+
Sbjct: 12  LRFDNIGKVFPGVRALDGVSFDVNVGQVHGLMGENGAGKSTLLKILGGEYQPDSGRVMID 71

Query: 68  GQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLLNYEAGLQ 127
           G+E+ F+   +++ AG+A+I+QEL  VP++TVAEN+ LGQLP+  G VN+         +
Sbjct: 72  GKEVRFTSAASSIAAGIAVIHQELQYVPDLTVAENLLLGQLPNSFGWVNKRDAKRFVRER 131

Query: 128 LKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIDNLFRVIR 187
           L+ +G+ +DP+  L+ LSI Q QMVEI KAL RNA++IA DEPTSSLS RE + LF+++R
Sbjct: 132 LEAMGVALDPNAKLRKLSIAQRQMVEICKALLRNARVIALDEPTSSLSHRETEVLFKLVR 191

Query: 188 ELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAMVGRDIGD 247
           +LR + R ++Y+SHRM+EI+ L DA T+F+DGR + +   ++ V  D +V  MVGR+I D
Sbjct: 192 DLRADNRAMIYISHRMDEIYELCDACTIFRDGRKIASHPTLEGVSRDTIVSEMVGREISD 251

Query: 248 IYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMKGMFGGTQ 307
           IY +  R  GE R    A++   +  P S  VR GEIVG FGLVGAGRSELM  ++G   
Sbjct: 252 IYNYSERPLGEVRFAAKAIEGHALSQPASFEVRRGEIVGFFGLVGAGRSELMHLVYGTEH 311

Query: 308 ITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISARRKHVLGG 367
              G++ +D + I ++    AI  G++LCPEDRK EGI+ + +V +NINIS RR ++  G
Sbjct: 312 KKGGELVLDGKTIRVKSAGEAIRHGIVLCPEDRKEEGIVAMATVSENINISCRRHYLRAG 371

Query: 368 CVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSE-EMKVILLDEP 426
             ++   E   AD  I+ L IKTP   Q I  LSGGNQQKAIL RWL+E ++KV++LDEP
Sbjct: 372 VFLDRKKEAETADRFIKLLKIKTPSRRQKIRFLSGGNQQKAILSRWLAEPDLKVVILDEP 431

Query: 427 TRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQA 486
           TRGIDVGAKHEIYNVIY LA +G A++  SS+LPEVLGV+DRIVVMR+G IAGEL  + A
Sbjct: 432 TRGIDVGAKHEIYNVIYQLAERGCAIVMISSELPEVLGVSDRIVVMRQGRIAGELSRKDA 491

Query: 487 DERQALSLAMPKVSQAV 503
            E+  LSLA+P+ S A+
Sbjct: 492 TEQAVLSLALPQSSTAL 508



 Score = 68.9 bits (167), Expect = 4e-16
 Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 8/223 (3%)

Query: 6   PYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVV 65
           P    R   K   G       SF+   G++    G  GAG+S L+ ++ G      G +V
Sbjct: 259 PLGEVRFAAKAIEGHALSQPASFEVRRGEIVGFFGLVGAGRSELMHLVYGTEHKKGGELV 318

Query: 66  INGQEMSFSDTTAALNAGVAII---YQELHLVPEMTVAENIYLGQLPH---KGGIVNRSL 119
           ++G+ +       A+  G+ +     +E  +V   TV+ENI +    H    G  ++R  
Sbjct: 319 LDGKTIRVKSAGEAIRHGIVLCPEDRKEEGIVAMATVSENINISCRRHYLRAGVFLDRKK 378

Query: 120 LNYEAGLQLKHLGMDI-DPDTPLKYLSIGQWQMVEIAKALAR-NAKIIAFDEPTSSLSAR 177
               A   +K L +        +++LS G  Q   +++ LA  + K++  DEPT  +   
Sbjct: 379 EAETADRFIKLLKIKTPSRRQKIRFLSGGNQQKAILSRWLAEPDLKVVILDEPTRGIDVG 438

Query: 178 EIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKDGR 220
               ++ VI +L + G  I+ +S  + E+  +SD I V + GR
Sbjct: 439 AKHEIYNVIYQLAERGCAIVMISSELPEVLGVSDRIVVMRQGR 481