Pairwise Alignments

Query, 228 a.a., flagellar assembly protein FliH from Escherichia coli ECRC98

Subject, 205 a.a., type III secretion system protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 31/200 (15%)

Query: 30  ETIIEEAEPSLEQQLAQLQMQAHEQGYQAGIAEGRQQGHKQGYQEGLAQGLEQGLAEAKS 89
           + +++ A+ +L ++   +   A  +  +  +A   +Q + +  +EG   GLEQG  E   
Sbjct: 18  QRVLKAADAALLREAQDILEAARARAAELELAA--RQAYDRRVEEGYRDGLEQGRLE--- 72

Query: 90  QQAPIHARMQQLVSEFQTTLDALDSVIASRLMQMALEAARQVIGQTPTVDNSALIKQIQQ 149
                HA  ++L+    ++++ ++ + A+ ++++  EA R+VIG     D+  +++ ++ 
Sbjct: 73  -----HA--EKLLETIMSSVEFIEGIEAT-VVRVVTEAVRKVIGDLG--DDERIVRIVRT 122

Query: 150 LL-----QQEPLFSGKPQLRVHPDDLQRVDDMLGATL-----SLHGWRLRGDPTLHPGGC 199
            L     QQ  +      +RV P D + V + LGA L     S     +  DP L  G C
Sbjct: 123 ALVAVRSQQRVV------VRVAPADERAVTEALGAMLQSAPGSASFLDVVADPRLERGAC 176

Query: 200 KVSADEGDLDASVATRWQEL 219
            + ++ G +DAS+ T+ + L
Sbjct: 177 LLESELGVVDASLETQLKAL 196