Pairwise Alignments

Query, 226 a.a., two-component response regulator DpiA from Escherichia coli ECRC62

Subject, 466 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 55.8 bits (133), Expect = 1e-12
 Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 25/222 (11%)

Query: 1   MTAPL-TLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARMMIERFKPGLILLDNY 59
           MT P  T+L+V+DE   A   A  +R     +++L+A +      ++ R  P ++L D  
Sbjct: 1   MTTPHETILVVDDEADFANGLARQLRAGFPDAEVLVATSGKAGLDLLGRSDPAVLLTDLR 60

Query: 60  LPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVFDYLIKPIAYERLGQTLT 119
           +PD  G+ L+           V+  TA   +ET   A++ G +D+L KP+  E L + ++
Sbjct: 61  MPDMDGLELMAHAQTQDATPSVILLTAHGTIETAVTALKNGAYDFLTKPVRREDLYRAVS 120

Query: 120 RFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGIDPLTLNAVRKLFKEPGVQHT 179
           +  +R  +L        +Q+ E  +            TG++   +       + P ++  
Sbjct: 121 KGLERCRLLR-----ENRQLREEMSR-----------TGMERTLIG------ETPAMRRL 158

Query: 180 AETVAQALTISRTTARRYLEYCASRHLIIAEIVHGKVGRPQR 221
            ET+A A+  S  T     E    + L+ A I H   GR QR
Sbjct: 159 KETIA-AVAASDYTVLVRGESGTGKELVAASI-HALSGRAQR 198