Pairwise Alignments

Query, 308 a.a., 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF from Escherichia coli ECRC62

Subject, 319 a.a., putative SAM-dependent methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  262 bits (669), Expect = 9e-75
 Identities = 134/298 (44%), Positives = 174/298 (58%), Gaps = 12/298 (4%)

Query: 7   GLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAV 66
           G HP N H   YD + L   +P L+ F+     G  S+DFA P AVKALN ALL H Y +
Sbjct: 20  GPHPDNAHRDGYDFSALVASHPPLKPFVRANAYGNLSIDFALPEAVKALNCALLKHHYGI 79

Query: 67  ANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANASILDIGVGANCIYPLIGVHEY 126
           + WDIP GFLCPP+PGR DY+HHL DLL +  GT      +LDIG GAN IY L+    +
Sbjct: 80  SRWDIPKGFLCPPIPGRVDYLHHLEDLLRQTPGT--DGLPLLDIGTGANGIYALLAASRF 137

Query: 127 GWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNP 186
           G     ++ +  +L++   I+ +NPGL + I LR Q     I  G+   NEQ+ A +CNP
Sbjct: 138 GRAVVATDIAKASLTNVATILKANPGLEKRISLRFQSNPRHILTGVTQTNEQFAACVCNP 197

Query: 187 PFHDSAAAARAGSERKRRNL----------GLNKDDALNFGGQQQELWCEGGEVTFIKKM 236
           PFH SAA A  G+ RK   L          G  K   LNFGGQ  ELWC+GGE +F+ ++
Sbjct: 198 PFHASAAEAALGTNRKLEGLAKSRGQRHISGPGKPQTLNFGGQDAELWCDGGERSFLLRL 257

Query: 237 IEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTF 294
           I+ES       +WFT+LVS+ +NL P  R L   GA ++   EM QGQK +R +AW F
Sbjct: 258 IDESARLPDLCVWFTTLVSKSDNLRPCKRRLEQRGASEIKVIEMQQGQKITRILAWRF 315