Pairwise Alignments

Query, 308 a.a., 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF from Escherichia coli ECRC62

Subject, 398 a.a., putative SAM-dependent methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  308 bits (788), Expect = 2e-88
 Identities = 161/321 (50%), Positives = 198/321 (61%), Gaps = 31/321 (9%)

Query: 7   GLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAV 66
           GLHPRN H   YD   L    PEL+ F+   P G  S+DFA+P AVK LN ALL   Y +
Sbjct: 72  GLHPRNLHGQGYDFDALMDTTPELKPFVRPNPYGNLSIDFADPRAVKLLNLALLRLHYGL 131

Query: 67  ANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANAS------------------IL 108
           + WDIP+GFLCPP+PGR DY+H+LADLLAE++   PA+                     L
Sbjct: 132 SYWDIPEGFLCPPIPGRVDYLHYLADLLAEST---PASKGGKRKLPNVTRAPKGERVVAL 188

Query: 109 DIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAI 168
           DIG GAN IYPL+G   YGWRF  S+    +L + + II++NP L   + LR Q +S  I
Sbjct: 189 DIGTGANGIYPLLGHQVYGWRFVASDIDPVSLKNVERIIANNPQLAGKLSLRLQSDSKQI 248

Query: 169 FNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNK----------DDALNFGG 218
           F GII   +++D TLCNPPFH S A A  GSERK +NL  NK           + LNFGG
Sbjct: 249 FTGIIRAEDRFDLTLCNPPFHASLAEASRGSERKLKNLAANKRAKGHEVAKSKEKLNFGG 308

Query: 219 QQQELWCEGGEVTFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKK 278
           Q+ ELWCEGGE  F+ +MI ES+ F  Q +WFTSLVS+ ENL P YR L  VGA +V   
Sbjct: 309 QKAELWCEGGEQAFLGQMIRESQKFGSQCLWFTSLVSKKENLKPCYRLLEQVGAKRVETL 368

Query: 279 EMAQGQKQSRFIAWTFMNDEQ 299
           EMAQG K +R +AWTF+  EQ
Sbjct: 369 EMAQGNKLTRVLAWTFLTPEQ 389