Pairwise Alignments

Query, 308 a.a., 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF from Escherichia coli ECRC62

Subject, 364 a.a., putative SAM-dependent methyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  295 bits (756), Expect = 8e-85
 Identities = 151/307 (49%), Positives = 198/307 (64%), Gaps = 8/307 (2%)

Query: 8   LHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSVDFANPLAVKALNKALLAHFYAVA 67
           LHPRN H + YD   L    P+L+ F+  TP G  S+DFA+P AVK LN ALL H Y +A
Sbjct: 53  LHPRNLHINGYDFPALMASFPKLKAFVRPTPYGALSIDFADPFAVKNLNAALLKHHYGLA 112

Query: 68  NWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIPANA-SILDIGVGANCIYPLIGVHEY 126
            WDIP G LCPP+PGR DY+H+LADLL E +    A A   LDIG GAN +Y ++G   Y
Sbjct: 113 FWDIPKGALCPPIPGRVDYLHYLADLLFEGAKVKRAAAIHALDIGTGANGVYAILGHQVY 172

Query: 127 GWRFTGSETSSQALSSAQAIISSNPGLNRAIRLRRQKESGAIFNGIIHKNEQYDATLCNP 186
            W+F  S+ + Q+L + Q II +NP L   + LRRQ++  A+F GII  +++++ TLCNP
Sbjct: 173 DWQFVASDINPQSLINVQRIIDNNPSLQGHLSLRRQQDDKAVFKGIIQASDRFELTLCNP 232

Query: 187 PFHDSAAAARAGSERKRRNLGLNKDD-------ALNFGGQQQELWCEGGEVTFIKKMIEE 239
           PFH S   A  GS RK RNL LN+ +        LNFGGQ  ELWC+GGE  F+  MI E
Sbjct: 233 PFHGSLKEASEGSLRKVRNLQLNRGEQPKATSATLNFGGQAAELWCQGGEKQFLATMIRE 292

Query: 240 SKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVVKKEMAQGQKQSRFIAWTFMNDEQ 299
           S+ FA+Q +WFTSLVS+ ENL P Y+AL  +G   V   EM QG K +R +AW+F +  +
Sbjct: 293 SQAFAEQCLWFTSLVSKQENLKPCYQALEKLGVDTVKTIEMQQGNKVTRVLAWSFHSQAK 352

Query: 300 RRRFVNR 306
           R ++ N+
Sbjct: 353 RLQWRNQ 359