Pairwise Alignments

Query, 684 a.a., DNA helicase IV from Escherichia coli ECRC62

Subject, 658 a.a., ATP-dependent DNA helicase Rep from Xanthomonas campestris pv. campestris strain 8004

 Score =  105 bits (262), Expect = 7e-27
 Identities = 102/339 (30%), Positives = 152/339 (44%), Gaps = 50/339 (14%)

Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256
           LNP Q+ AV++ E  LLVLAGAGSGKT V+V +   L+A G    ++I  + F  K+A+E
Sbjct: 4   LNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKSAKE 63

Query: 257 MDERIRERLH---TEDITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313
           M ER+ +R+     + +T  TFHAL L  +Q           +E+  A     F      
Sbjct: 64  MRERVAKRIRGDGADGLTICTFHALGLKFLQ-----------IEHAAAGLKRGFSI---F 109

Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373
              +  AQ K       + M  + P+    +D K            +S  +  G +  + 
Sbjct: 110 DSDDAAAQIK-------DLMHGAKPDA--IEDAK----------NLISRAKNAGMSPEQA 150

Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKG-RFISPWK 432
           +A+A        S R K  A L + ++  L   NAVDF  LI   + ILE     +  W+
Sbjct: 151 MAAAR-------SNREKEAASLYERYQARLTTFNAVDFDDLIRLPVQILEANEEIVMGWR 203

Query: 433 ----HILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488
               ++LVDE QD +  +  LL  L       T   VGDD Q+IY + GA          
Sbjct: 204 ERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFT--CVGDDDQSIYAWRGANPENLQQMGR 261

Query: 489 NFGEGDRCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527
           ++   +   L+  YR ++R+   AN  I  NP +  K L
Sbjct: 262 DYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEHLKTL 300



 Score = 52.4 bits (124), Expect = 7e-11
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 13/76 (17%)

Query: 588 QIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPVEDFPDAEERRLMY 647
           Q+  MT+HASKG +  YV IVG ++G         E  +EE  L         EERRL+Y
Sbjct: 541 QVRMMTMHASKGLEFRYVFIVGCEDG-----VLPHEVSLEEGNL--------QEERRLLY 587

Query: 648 VALTRARHRVWALFNK 663
           V +TRA+ ++W  ++K
Sbjct: 588 VGITRAKQQLWMSYSK 603