Pairwise Alignments

Query, 684 a.a., DNA helicase IV from Escherichia coli ECRC62

Subject, 661 a.a., UvrD-helicase domain-containing protein from Dyella japonica UNC79MFTsu3.2

 Score =  108 bits (270), Expect = 8e-28
 Identities = 101/339 (29%), Positives = 148/339 (43%), Gaps = 49/339 (14%)

Query: 197 LNPAQARAVVNGEHSLLVLAGAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEE 256
           LNP Q  AV + +  LLVLAGAGSGKTSV+  +  +L+ R   +P +I  + F  KAA+E
Sbjct: 2   LNPQQLAAVEHCDTPLLVLAGAGSGKTSVITQKIAYLIQRRRLAPSRIAAITFTNKAAKE 61

Query: 257 MDERIRERLHTED---ITARTFHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRK 313
           M ER+ + + +ED   +T  TFHAL L  +Q    +  +        A   E+ + E   
Sbjct: 62  MRERVAKLISSEDAAALTVCTFHALGLKFLQIEHARAGLRKGFSVLDADDSEVILKE--- 118

Query: 314 QCSEKKAQAKGWRQWLTEEMQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEM 373
                                   P+G   D     R L SR          + G   E 
Sbjct: 119 ----------------------LAPKGAKPDVLFGIRSLVSR--------AKNAGLSPEE 148

Query: 374 IASAPEEIRDLFSKRIKLMAPLLKAWKGALKAENAVDFSGLIHQAIVILE-----KGRFI 428
             +A    R++ +      A +   ++  L A NAVDF  LI   + ILE     +  + 
Sbjct: 149 ATAAARSPREMDA------AMIYTLYQARLAAFNAVDFDDLIRLPLRILESDEECRAAWR 202

Query: 429 SPWKHILVDEFQDISPQRAALLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHE 488
              +++LVDE+QD +  +  LL AL  +    T   VGDD Q+IY + GA         +
Sbjct: 203 ERLRYLLVDEYQDTNDAQYRLLKALAGERGGFT--CVGDDDQSIYAWRGANPENIDQLSK 260

Query: 489 NFGEGDRCDLDTTYRFNSRIGEVANRFIQQNPGQLKKPL 527
           ++       L+  YR   RI   AN+ I  NP   +K L
Sbjct: 261 DWPSLRVIKLEQNYRCGRRILRAANKLIANNPHLHEKKL 299



 Score = 43.1 bits (100), Expect = 4e-08
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 13/80 (16%)

Query: 575 ASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARESIMEEALLPPV 634
           A L  A    P   +  MT+HA+KG +  +V IVG +EG+     A  E  ++       
Sbjct: 528 ALLSHADRDEPGNALRMMTLHAAKGLEFRFVFIVGCEEGTLPHDGAMDEGRVD------- 580

Query: 635 EDFPDAEERRLMYVALTRAR 654
                 EERRLMYV +TRA+
Sbjct: 581 ------EERRLMYVGITRAK 594