Pairwise Alignments
Query, 151 a.a., curlin minor subunit CsgB from Escherichia coli ECRC62
Subject, 502 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1
Score = 52.4 bits (124), Expect = 1e-11
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 17/125 (13%)
Query: 19 AAAAGYDLANSEYNFAVNELS--KSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGS 76
A +G+ LA S +NE+S ++ Q ++ Q G N+A + Q G+ +A V Q+G
Sbjct: 16 AGLSGHALAAS----TINEISVKQTGEGQDTLVAQTGVINAAAVTQTGNAQVATVVQDGV 71
Query: 77 SNRAKIDQTGDYN-----------LAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKAN 125
+ A+++ TGD N +A +D G+ N+A ++Q + N + G+ N +
Sbjct: 72 WHEAQVNSTGDANEVTVSQQTDWHVAAVDVTGNNNEAEVTQDGFFNQSSNDVVGNDNLVS 131
Query: 126 ITQYG 130
+ Q G
Sbjct: 132 VNQLG 136
Score = 48.5 bits (114), Expect = 1e-10
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 47 AIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQ 106
A G GT+N L G V G N +I Q GD N AY+D G+ N+ ++ Q
Sbjct: 330 ATFGAYGTDNDFDLSSKGDNNELVAFATGEDNSIEISQEGDANFAYVDATGNDNEVNVEQ 389
Query: 107 GAYGNTAMIIQKGSGNKANIT 127
N +I +G+ N A++T
Sbjct: 390 DGDQNETIITVEGN-NNADVT 409
Score = 48.1 bits (113), Expect = 2e-10
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 47 AIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQ 106
A + G NN A++ Q G + G+ N ++Q G+ N +Y++ G+ N A + Q
Sbjct: 97 AAVDVTGNNNEAEVTQDGFFNQSSNDVVGNDNLVSVNQLGELNESYVEITGNENSAFVEQ 156
Query: 107 GAYGNTAMIIQKGSGNKANITQYGTQKTA 135
N A+ +G N +I QYG A
Sbjct: 157 EGDENLAVFRVEGDNNDGDIKQYGNNNQA 185
Score = 42.7 bits (99), Expect = 8e-09
Identities = 25/85 (29%), Positives = 34/85 (40%)
Query: 53 GTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNT 112
G +N L+Q G A G+ N + GD N G N ISQ N
Sbjct: 314 GDSNDVDLKQRGDANFATFGAYGTDNDFDLSSKGDNNELVAFATGEDNSIEISQEGDANF 373
Query: 113 AMIIQKGSGNKANITQYGTQKTAIV 137
A + G+ N+ N+ Q G Q I+
Sbjct: 374 AYVDATGNDNEVNVEQDGDQNETII 398
Score = 42.4 bits (98), Expect = 1e-08
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 37 ELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQA 96
+LS N + G +NS ++ Q G A V G+ N ++Q GD N I
Sbjct: 342 DLSSKGDNNELVAFATGEDNSIEISQEGDANFAYVDATGNDNEVNVEQDGDQNETIITVE 401
Query: 97 GSANDASISQGAYGNTAMI--IQKGSGNKANITQYGT 131
G+ N + G+ +I I +G N A ITQ G+
Sbjct: 402 GNNNADVTALQHRGDLNLIDLIIEGDENAAEITQAGS 438
Score = 41.6 bits (96), Expect = 2e-08
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 37 ELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNR--AKIDQTGDYNLAYID 94
E+S+ A + G +N + Q G + ++ EG++N + GD NL +
Sbjct: 364 EISQEGDANFAYVDATGNDNEVNVEQDGDQNETIITVEGNNNADVTALQHRGDLNLIDLI 423
Query: 95 QAGSANDASISQGAYGN-----------TAMIIQKGSGNKANITQYGTQKTAIVVQRQSQ 143
G N A I+Q GN + G N ITQ G + Q +
Sbjct: 424 IEGDENAAEITQAGSGNWVGGDSSSSFAASSFGVSGDNNSLMITQTGNDNLVLGSQAGNN 483
Query: 144 MAIRVTQ 150
+I VTQ
Sbjct: 484 NSISVTQ 490
Score = 40.0 bits (92), Expect = 5e-08
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 24 YDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSK------LLAVVAQEGSS 77
Y LA SE + ++ + + S N A + G +N+ + Q G L+A + +G
Sbjct: 239 YALAGSENDISMEQ--EGSNNTAYLSMTTGDDNTVDITQDGDSNTVGDSLIADI--QGDD 294
Query: 78 NRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIV 137
N I Q GD N A G +ND + Q N A G+ N +++ G +
Sbjct: 295 NDITIKQKGDSNGAEFQVWGDSNDVDLKQRGDANFATFGAYGTDNDFDLSSKGDNNELVA 354
Query: 138 VQRQSQMAIRVTQ 150
+I ++Q
Sbjct: 355 FATGEDNSIEISQ 367
Score = 40.0 bits (92), Expect = 5e-08
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 39 SKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQ 95
S SSF A+ G +G NNS + Q G+ L + +Q G++N + Q+GD N+A + Q
Sbjct: 446 SSSSF-AASSFGVSGDNNSLMITQTGNDNLVLGSQAGNNNSISVTQSGDMNVATVVQ 501
Score = 39.7 bits (91), Expect = 7e-08
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 37 ELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQA 96
E+++ F + G +N + Q G + V G+ N A ++Q GD NLA
Sbjct: 109 EVTQDGFFNQSSNDVVGNDNLVSVNQLGELNESYVEITGNENSAFVEQEGDENLAVFRVE 168
Query: 97 GSANDASISQGAYGNTAMII------QKGSGNKANITQYG 130
G ND I Q N A +I G+ N ++ Q G
Sbjct: 169 GDNNDGDIKQYGNNNQAGLIALDLSANVGNNNDVSVEQIG 208
Score = 37.7 bits (86), Expect = 3e-07
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 13/105 (12%)
Query: 48 IIGQAGTNNS--AQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQ---------- 95
II G NN+ L+ G L + EG N A+I Q G N D
Sbjct: 397 IITVEGNNNADVTALQHRGDLNLIDLIIEGDENAAEITQAGSGNWVGGDSSSSFAASSFG 456
Query: 96 -AGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQ 139
+G N I+Q N + Q G+ N ++TQ G A VVQ
Sbjct: 457 VSGDNNSLMITQTGNDNLVLGSQAGNNNSISVTQSGDMNVATVVQ 501
Score = 36.6 bits (83), Expect = 6e-07
Identities = 23/77 (29%), Positives = 32/77 (41%)
Query: 53 GTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNT 112
G N+A++ Q GS S + +GD N I Q G+ N SQ N+
Sbjct: 426 GDENAAEITQAGSGNWVGGDSSSSFAASSFGVSGDNNSLMITQTGNDNLVLGSQAGNNNS 485
Query: 113 AMIIQKGSGNKANITQY 129
+ Q G N A + QY
Sbjct: 486 ISVTQSGDMNVATVVQY 502
Score = 35.0 bits (79), Expect = 2e-06
Identities = 22/80 (27%), Positives = 33/80 (41%)
Query: 71 VAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYG 130
V Q G + QTG N A + Q G+A A++ Q + A + G N+ ++Q
Sbjct: 33 VKQTGEGQDTLVAQTGVINAAAVTQTGNAQVATVVQDGVWHEAQVNSTGDANEVTVSQQT 92
Query: 131 TQKTAIVVQRQSQMAIRVTQ 150
A V + VTQ
Sbjct: 93 DWHVAAVDVTGNNNEAEVTQ 112
Score = 32.3 bits (72), Expect = 1e-05
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 96 AGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQ 139
A + N+ S+ Q G ++ Q G N A +TQ G + A VVQ
Sbjct: 25 ASTINEISVKQTGEGQDTLVAQTGVINAAAVTQTGNAQVATVVQ 68
Score = 32.3 bits (72), Expect = 1e-05
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 78 NRAKIDQTGDYNLAYIDQAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIV 137
N + QTG+ + Q G N A+++Q A ++Q G ++A + G V
Sbjct: 29 NEISVKQTGEGQDTLVAQTGVINAAAVTQTGNAQVATVVQDGVWHEAQVNSTGDANEVTV 88
Query: 138 VQR 140
Q+
Sbjct: 89 SQQ 91