Pairwise Alignments

Query, 477 a.a., PTS glucose transporter subunit IIBC from Escherichia coli ECRC62

Subject, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

 Score =  304 bits (778), Expect = 5e-87
 Identities = 184/527 (34%), Positives = 275/527 (52%), Gaps = 80/527 (15%)

Query: 4   NAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIF 63
           N     QK+GK+LMLP++ LP+A +LL +G  +   +P      MA AG ++F+ +PL+F
Sbjct: 2   NILGYAQKLGKALMLPIATLPVAALLLRLGQPDLLGIP-----FMAAAGDAIFSQLPLLF 56

Query: 64  AIGVALGFTNN-DGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIASKHLADTGVLGGI 122
            +G+A+G + +  G + LA  VAY ++  T   +   +              +    GGI
Sbjct: 57  GLGIAIGLSKDGSGAAGLAGAVAYFVLSATAKTIDASI--------------NMSFFGGI 102

Query: 123 ISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIFTGVVLSFIWPPIGSAIQTF 182
            +G IA + +N F+  +LPE+L FFAGKR VPI++GL A+  G +   IWP I   +   
Sbjct: 103 FAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDAL 162

Query: 183 SQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPFQMQIGEY-------TNAAGQ---- 231
           +   +    +  F +YG + R L+P GLHH+ N  F   +G           AAGQ    
Sbjct: 163 AHAVSTSGALGQF-VYGTLNRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPA 221

Query: 232 ------------------------------------------VFHGDIPRYMAGDPTAGK 249
                                                     V  GD+ R+  GD +AG 
Sbjct: 222 LEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGV 281

Query: 250 LSGGFL-FKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVA 308
              GF    M+GLP AA+A++ +A  E R +VGG + S A  SFLTGITEP+EF F+F+A
Sbjct: 282 FMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLA 341

Query: 309 PILYIIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVY 368
           P LY +HA+  GL+  +  + G   G  FS GLIDF++  G ++K     ++G+ +  +Y
Sbjct: 342 PALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLLNWGLATKPATLFVIGLAFFALY 401

Query: 369 YTIFRVLIKALDLKTPGRED----ATEDAKATGTSEMAPALVAAFGGKENITNLDACITR 424
           +  F   I+A +LK+PGRED       D+      ++A   + A GG EN+T++DACITR
Sbjct: 402 FFTFTFAIRAFNLKSPGREDEEVETETDSADASKGDLARQYLKALGGHENLTSIDACITR 461

Query: 425 LRVSVADVSKVDQAGLKKLGAAGVVVAG-SGVQAIFGTKSDNLKTEM 470
           LR+++ D S  D+A LKKLGA GVV  G + +Q I G  ++ +  EM
Sbjct: 462 LRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEM 508