Pairwise Alignments

Query, 368 a.a., tRNA 2-thiouridine(34) synthase MnmA from Escherichia coli ECRC62

Subject, 351 a.a., putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  216 bits (550), Expect = 7e-61
 Identities = 126/355 (35%), Positives = 198/355 (55%), Gaps = 27/355 (7%)

Query: 12  MSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHT 71
           MSGG+DS+ +  +LQ+QGY++ G+ M+ W ++             DA+ +  ++GIE + 
Sbjct: 1   MSGGIDSTATCLMLQEQGYEIVGVTMRVWGDEP-----------QDARELAARMGIEHYV 49

Query: 72  VNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVR 131
            +    + + + + F+ EYK GRTPNP ++CN   KF+   E+A + L   YIATGHY R
Sbjct: 50  ADERIPFKETIVKNFIDEYKQGRTPNPCVMCNPLFKFRVLAEWA-DKLDCAYIATGHYSR 108

Query: 132 RADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGL-VTA 190
             +  G   ++ G D  KDQSYFL+ L  + + + +FP+G+  K +VR+   + G    +
Sbjct: 109 LEERSGHIYIVAGDDDKKDQSYFLWRLGQDILKRCIFPLGDYTKIKVREYLAEKGYEAKS 168

Query: 191 KKKDSTGICFIGERKFREFLGRYLPAQ-----PGKIITVDGDEIGEHQGLMYHTLGQRKG 245
           K+ +S  +CFI +  +R+FL    P       PG  +  +G ++G+H+G  Y+T+GQRKG
Sbjct: 169 KEGESMEVCFI-QGDYRDFLREQCPELDTEIGPGWFVNSEGVKLGQHKGAPYYTIGQRKG 227

Query: 246 LGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMR 305
           L I   K     P YV+  + + N +++    +   L +  ++A+Q   VD +       
Sbjct: 228 LEIALGK-----PAYVLKINPQKNTVMLGDAEQ---LQTEYMLAEQDRIVDEQELFSCEN 279

Query: 306 CTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGII 360
             V+ RYR   IPC VK L+D R+ V F E  +AV PGQSAVFY+G   LGG  I
Sbjct: 280 LAVRIRYRSRPIPCRVKRLEDGRLLVRFRETASAVAPGQSAVFYDGRRVLGGAFI 334