Pairwise Alignments

Query, 429 a.a., sugar ABC transporter permease from Escherichia coli ECRC62

Subject, 521 a.a., maltose ABC transporter, permease component 1 (MalF) (from data) from Pseudomonas stutzeri RCH2

 Score =  158 bits (399), Expect = 4e-43
 Identities = 91/262 (34%), Positives = 140/262 (53%), Gaps = 12/262 (4%)

Query: 168 PKNLVDWVGIKNFIMLFKFKIWSDTFLGVALWTFIWAICATIFTFSFGFILALALAKKNI 227
           P     + G  NF  +       + F+ +  WTF +A    +FT + G +LA  L  + +
Sbjct: 261 PPGFTVFTGFANFSRVLTEPSIREPFMQIFAWTFAFAGLTVVFTLAVGLVLASLLQWELV 320

Query: 228 RFAKVWRLIFILPYAIPTFVTLLIFRLLLN-GIGPVNSFLNSIGMNSVDFLSVPLNAKIT 286
           R    +RL+ ILPYA+P F+++L+FR L N   G +N  L  +     D+ S P  A+  
Sbjct: 321 RGKAFYRLMLILPYAVPGFISILVFRGLFNQNFGEINLLLEGLFGIRPDWFSDPSLARTM 380

Query: 287 VIAVCVWVGAPYFMLLIAGALTNISRDLYEASEVDGATKWQQFKEITLPMVLHQVAPTLV 346
           ++ V  W+G PY +LL  G L  I RD YEAS +DGA+       ITLP ++  + P L+
Sbjct: 381 ILIVNTWLGYPYMLLLCMGLLQAIPRDQYEASAIDGASPLDNLLRITLPQLIKPLMPLLI 440

Query: 347 MTFAYNFNNFGAIYLLTEGGP-----TNPEYRFAGHTDIFITWIYKLTL--NFQQYHIAS 399
             FA+NFNNF  I LLT GGP     T P    AG TD+ +++ Y++    + Q + +A+
Sbjct: 441 ACFAFNFNNFVLITLLTRGGPDIIGATTP----AGTTDLLVSYTYRIAFQDSGQDFALAA 496

Query: 400 VISIIIFIFLSVIAIWQFRRMK 421
            I+ +IFI +  +A+   +  K
Sbjct: 497 AIATMIFILVGAMALLNLKLSK 518



 Score = 32.0 bits (71), Expect = 5e-05
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 123 KLYEDKFAFIVLTPAFLASIAFIVLPIVITVLVSFTNYAAPN 164
           ++Y  ++ F    P+    + F++ P++ TV + FTNY+  N
Sbjct: 74  RMYAQRYIF----PSVAGMLVFVIFPLLYTVGIGFTNYSGTN 111