Pairwise Alignments

Query, 429 a.a., sugar ABC transporter permease from Escherichia coli ECRC62

Subject, 308 a.a., N-Acetyl-D-glucosamine ABC transport system, permease component 1 (from data) from Phaeobacter inhibens DSM 17395

 Score =  102 bits (253), Expect = 2e-26
 Identities = 90/299 (30%), Positives = 143/299 (47%), Gaps = 30/299 (10%)

Query: 132 IVLTPAFLASIAFIVLPIVITVLVSFTNYAAPNHIPPKNLVDWVGIKNFIMLFKFKIWSD 191
           + L PA L   A ++ P+  T+ ++   Y+  + I       +VG+ NF  LF    WS+
Sbjct: 16  VFLAPAVLVYTAIMIFPLFNTLRLAL--YSESDQIR-----QFVGLANFETLFGNPNWSE 68

Query: 192 TF---LGVALWTFIWAICATIFTFSFGFILALALAKKNIRFAKVWRLIFILPYAIPTFVT 248
            F   LG   W F   +   +     G  LA  L+   +RFA ++R    +P  +   + 
Sbjct: 69  QFWNALGNNFWFFFVHM---LVQNPIGVALAAILSHPRLRFAALYRTAIFVPTILSFVIV 125

Query: 249 LLIFRLLLNGI-GPVNSFLNSIGMNSV--DFLSVPLNAKITVIAVCVW--VGAPYFMLLI 303
              ++L+L+ I G     L++IG+  +   +L     A  T+  + VW  VG P  M+LI
Sbjct: 126 GFAWKLILSPIWGITPDLLDAIGLKWLFAPWLGKEDYALTTLALISVWQFVGIP--MMLI 183

Query: 304 AGALTNISRDLYEASEVDGATKWQQFKEITLPMVLHQVAPTLVMTFAYNFNNFGAIYLLT 363
             AL +I  ++ EA EVDG T    F +I LP++L  +    ++TF  NFN F  IY  T
Sbjct: 184 YAALLSIPEEVIEAGEVDGITGMSAFWKIKLPLILPSIGIISILTFVGNFNAFDLIY-TT 242

Query: 364 EGGPTNPEYRFAGHTDIFITWIYKLTLNFQ----QYHIASVISIIIF-IFLSVIAIWQF 417
           +G    P++     TDI  T++Y+    FQ      H+ S I+  +F I L  + I+ F
Sbjct: 243 QGALAGPDF----STDILGTFMYRTFFGFQLQLGDPHMGSAIATAMFAIILIGVCIYLF 297