Pairwise Alignments

Query, 121 a.a., flagellar type III secretion system protein FliO from Escherichia coli ECRC62

Subject, 135 a.a., flagellar biosynthesis protein, FliO (RefSeq) from Shewanella sp. ANA-3

 Score = 57.8 bits (138), Expect = 5e-14
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 12  PVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVV 71
           P   A    + G LI ++ LI A A+L++R    P    V  LK  A  SLG +ER+V+V
Sbjct: 34  PSQMAAAASMLGGLILVLLLIFALAYLLRRFNLVPTNHSV--LKTLAVTSLGQKERLVLV 91

Query: 72  DVEDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMK 112
            V + + +LGV+  Q+NL+ KL   A   EI  T F   ++
Sbjct: 92  QVGEQQYLLGVSGQQVNLIDKL---AEPIEIESTSFADKLR 129