Pairwise Alignments

Query, 134 a.a., DNA-binding protein StpA from Escherichia coli ECRC62

Subject, 130 a.a., H-NS family DNA-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.0 bits (219), Expect = 2e-23
 Identities = 55/134 (41%), Positives = 74/134 (55%), Gaps = 4/134 (2%)

Query: 1   MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKIST 60
           MS  L+ L + R L+A  ++ S+D L ++  K   +  ER  E E++ +  AER  KI  
Sbjct: 1   MSEFLEILTHGRRLKAAVKDLSLDELRDLGAKLEKIIVEREAEAEEELKANAERIAKIEE 60

Query: 61  WLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIA 120
             + M   G++ E+L      AA  A KKR PRP KYK   V+GE  TWTGQGR P    
Sbjct: 61  IRKQMAEIGLSVEDL---GVTAAKPAAKKRAPRPPKYKIV-VDGEEITWTGQGRMPTVFK 116

Query: 121 QALAEGKSLDDFLI 134
            A+  G S+DDFLI
Sbjct: 117 NAVEGGASMDDFLI 130