Pairwise Alignments

Query, 134 a.a., DNA-binding protein StpA from Escherichia coli ECRC62

Subject, 130 a.a., histone family protein nucleoid-structuring protein H-NS (RefSeq) from Shewanella loihica PV-4

 Score = 96.7 bits (239), Expect = 1e-25
 Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 4/134 (2%)

Query: 1   MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEEEQQQRELAERQEKIST 60
           MS  L  L + R  +A  ++ S++ L+++  K   +  E+ ++ E++   +AER  KI  
Sbjct: 1   MSEFLDILTHGRRFKAAVKDLSVEDLKDVAVKLEKIITEKEKQAEEESAVMAERNAKIEE 60

Query: 61  WLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDVNGETKTWTGQGRTPKPIA 120
             + M+A G++ ++L    + AA  A KKR PRP KYK  +VNGET TWTGQGRTP    
Sbjct: 61  IRQQMEAVGLSIDDL---GTVAAKPAPKKRAPRPPKYKI-EVNGETITWTGQGRTPTVFK 116

Query: 121 QALAEGKSLDDFLI 134
             L +G+SL+DFLI
Sbjct: 117 NELDKGRSLEDFLI 130