Pairwise Alignments

Query, 592 a.a., Putative uric acid sigma-54-dependent transcriptional regulator UacR from Escherichia coli ECRC62

Subject, 469 a.a., nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) from Shewanella loihica PV-4

 Score =  248 bits (632), Expect = 5e-70
 Identities = 152/353 (43%), Positives = 218/353 (61%), Gaps = 19/353 (5%)

Query: 252 HQSHTSFSVANAPDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVAR 311
           H    S  V + P E    +++GE   M+++ R I R++ S  SV++ G+SGTGKE+VA 
Sbjct: 120 HAKEQSPKVISQP-EVKAPEIIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKELVAG 178

Query: 312 AIHKLSGRRNKPFIAINCAAIPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFL 371
           A+HK S R++KPFIA+N AAIP++L+ESELFG+ KGAFTGA AN + G  + A+ GTLFL
Sbjct: 179 ALHKHSPRKDKPFIALNMAAIPKELIESELFGHEKGAFTGA-ANVRQGRFEQADGGTLFL 237

Query: 372 DEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLF 431
           DEIGDMPL +Q +LLR +   +   IG  SP+QVD+RII+AT+QNL   +A+G FREDLF
Sbjct: 238 DEIGDMPLDVQTRLLRVLADGQFYRIGGHSPVQVDVRIIAATHQNLESLVAKGDFREDLF 297

Query: 432 YRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGI-APDVVEILRKHRWPGNL 490
           +RLNVI + LPPL +R+EDI  L  +FL    + + SV P I      + L    WPGN+
Sbjct: 298 HRLNVIRVHLPPLSQRREDIPQLARHFLATAAKEI-SVEPKILTKATADTLASLPWPGNV 356

Query: 491 RELSNLMEYLVNVVPSGEVIDSTLLPPNLLNNGTTEQSD-----------VTEVSEAHLS 539
           R+L N   +L+ V+ SG+ I    LPP LL    +  S            +T+  +  LS
Sbjct: 357 RQLENTCRWLM-VMASGQEILPQDLPPELLTPSNSHDSSPQAGSGGWQEALTQWIDQRLS 415

Query: 540 LDDAG-GTALEEMEKQMIREALSRHNS--KKQVADELGIGIATLYRKIKKYEL 589
             ++   T ++   ++++ E   +H    K++ A  LG G  TL RK+K+ E+
Sbjct: 416 EGESDLLTQIQPAFEKILLETALKHTKGHKQEAAKRLGWGRNTLTRKLKELEM 468