Pairwise Alignments

Query, 592 a.a., Putative uric acid sigma-54-dependent transcriptional regulator UacR from Escherichia coli ECRC62

Subject, 450 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  252 bits (644), Expect = 2e-71
 Identities = 136/320 (42%), Positives = 209/320 (65%), Gaps = 16/320 (5%)

Query: 272 LVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAA 331
           LVG   +M+++ + + R++ + ++V++ GESGTGKE+ ARA+++LS R +KPF+AINC A
Sbjct: 146 LVGRSALMQKVYQRVQRVSATDATVLIGGESGTGKELAARALYQLSARSHKPFVAINCGA 205

Query: 332 IPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEA 391
           IPE L E+ELFG  KGA+TGA+   K G ++AA+ GT+FLDEIG++PL+ Q KLLR ++ 
Sbjct: 206 IPESLAEAELFGAEKGAYTGANTQ-KIGKLEAADGGTVFLDEIGELPLLQQTKLLRFLQE 264

Query: 392 REILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQEDI 451
             I  +G +S I++D+R+I+AT+++L Q +AEG+FREDL+YRLNV+PI +P LRER EDI
Sbjct: 265 GVISRLGQNSEIKLDVRVIAATHRDLQQEVAEGRFREDLYYRLNVVPIHMPALRERPEDI 324

Query: 452 ELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGEVID 511
             LV +FL LH  + G   P ++ D ++ L  H WPGN+REL+N +E  V +    E++ 
Sbjct: 325 GRLVEHFLKLHANQYGMEVPKLSRDTLKSLLDHSWPGNVRELANRIERFVLLGDEEEMVQ 384

Query: 512 STLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSR-HNSKKQVA 570
                P  L+   T++  + E            G   E  EK  +R+AL R   ++ + A
Sbjct: 385 ELGAAPQPLD---TKRFVLPE-----------AGIEWESFEKDCLRQALDRFEGNRTKAA 430

Query: 571 DELGIGIATLYRKIKKYELL 590
             LG+       +++KY+L+
Sbjct: 431 KCLGLSYKAFLYRLEKYQLV 450