Pairwise Alignments

Query, 592 a.a., Putative uric acid sigma-54-dependent transcriptional regulator UacR from Escherichia coli ECRC62

Subject, 486 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  254 bits (649), Expect = 6e-72
 Identities = 149/337 (44%), Positives = 204/337 (60%), Gaps = 18/337 (5%)

Query: 270 EQLVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINC 329
           E LVG  R M Q+ + I R AP+ + V+V GESGTGKE+VARA+++ S R  KPF+ INC
Sbjct: 144 EALVGTSRAMHQVYKAIGRAAPTDALVLVRGESGTGKELVARAVYQHSLRGEKPFLIINC 203

Query: 330 AAIPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAI 389
            AIP+ LLESELFGY KGAFTGA+ N + G I+ AN GT+FLDEIGDMPL +QAKLLR +
Sbjct: 204 VAIPDTLLESELFGYEKGAFTGAT-NRRVGKIEQANGGTVFLDEIGDMPLGIQAKLLRLL 262

Query: 390 EAREILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQE 449
           + ++I  +G   PI VD+RII+ATN +L   +A+G+FREDL+YRL V+ + LPPLRER E
Sbjct: 263 QEKQIERLGGRQPIPVDVRIIAATNTDLEAAVADGRFREDLYYRLKVVTLWLPPLRERSE 322

Query: 450 DIELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGEV 509
           DI  L  YFL   +R +    PGI P+ +  L    WPGN+REL N +   +     G +
Sbjct: 323 DIPPLARYFLARFSREMDMPNPGITPEALAYLEAQPWPGNVRELGNSVHKALVFSRGGPL 382

Query: 510 IDSTLLPPNLLNNGTTEQSD-------------VTEVSEAHLSLDDAGG---TALEEMEK 553
            +  L      + G    S+             + E+    LS  D      + ++ + +
Sbjct: 383 GEPDLKQALEASRGVRPGSEGPACDLSLAADQTMQELIRRTLSESDGDNVFDSLMDHVGR 442

Query: 554 QMIREALS-RHNSKKQVADELGIGIATLYRKIKKYEL 589
            ++REAL     ++ + A  LG+   TL  KI+KY L
Sbjct: 443 LVVREALHLTGGNRTRAARLLGLSRPTLLAKIEKYGL 479