Pairwise Alignments

Query, 890 a.a., bifunctional uridylyltransferase/uridylyl-removing protein GlnD from Escherichia coli ECRC62

Subject, 857 a.a., PII uridylyl-transferase (RefSeq) from Shewanella loihica PV-4

 Score =  803 bits (2073), Expect = 0.0
 Identities = 416/842 (49%), Positives = 560/842 (66%), Gaps = 6/842 (0%)

Query: 49  DAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHPLSDIDL 108
           + F  G S   L+  R  F+D+LL   W +A       +AL+AVGGYGRGELHP SD+DL
Sbjct: 20  ERFSAGESVTALVSQRCRFVDELLIAQW-QAHQLDTTPVALIAVGGYGRGELHPQSDVDL 78

Query: 109 LILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVATNLIESRLL 168
           L L +  L      K+ + +  LWD  LEVGHSVRT++E + +G +D+T+ATNL+E+RLL
Sbjct: 79  LFLIQGSLAPSDEAKLSQFIAFLWDAGLEVGHSVRTIDETIAQGKADITIATNLLEARLL 138

Query: 169 IGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPDIKSSPGGLRD 228
            G  A+F  L   +    FWP+  F+ AK +EQ  RH +   ++++LEP++KS PGGLRD
Sbjct: 139 CGPQAMFNTLYDKVREGDFWPASDFFVAKRDEQVARHAK--ASAFDLEPNLKSCPGGLRD 196

Query: 229 IHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFALHLVVSRYDNRLL 288
           I T+ WVA R+F A+  +E+V  GFL   E  EL EC   LW++RFALHL+  R +NRLL
Sbjct: 197 IQTITWVAMRYFDASCAEELVAHGFLEQDELEELLECQGYLWQLRFALHLISGRDENRLL 256

Query: 289 FDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLFDEAILALPADEKPR 348
           FD Q  VA+ L Y  E    VE+MMK Y+R  RRV ELNQMLLQLF  A L    + + +
Sbjct: 257 FDLQRQVAELLGYKDETQLAVEQMMKRYYRTVRRVMELNQMLLQLFKRATLGHTKELEIQ 316

Query: 349 PIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGIYSTTLRQLRHARRHLQ 408
           PID+++Q RG+ I+     LF   P  I+R+F    RNS I GIY+ TLR LR ARR  Q
Sbjct: 317 PIDEDYQRRGSFIESLQADLF-DDPVEIMRLFLHTARNSNIKGIYAPTLRSLRRARRAQQ 375

Query: 409 QPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQWSHIVGQMQFDLFHAYTV 468
            PL +  + RK+FL ILRHP  +   L  MHRH +L AY+P W +I GQMQFDLFHAYTV
Sbjct: 376 TPLMDSEDCRKVFLEILRHPRGIA-SLSLMHRHGILSAYLPAWRNIEGQMQFDLFHAYTV 434

Query: 469 DEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIFIAALFHDIAKGRGGDHSILG 528
           DEHT R++L ++ F+  E +   PL   +  +LP   L+ +AA+FHDI KGRGGDHS LG
Sbjct: 435 DEHTHRLLLNIDRFSQTEQKDEFPLGSILINQLPKKGLLVLAAIFHDIGKGRGGDHSKLG 494

Query: 529 AQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRRDIQDPEVIKQFAEEVQTENRLR 588
           A D   F +LHGLN  + +LV+WLV  HL+MSVTAQRRDI DP+V+ +FA+ V+    L 
Sbjct: 495 AVDAQEFCDLHGLNKHDGRLVSWLVENHLVMSVTAQRRDISDPDVVAEFADRVRDAVHLS 554

Query: 589 YLVCLTVADICATNETLWNSWKQSLLRELYFATEKQLRRGMQNTPDMRERVRHHQLQALA 648
           YL CLTVADICATNE  WN+WK SLLR+LYF+T++ L RG +   D+R RVR HQ +A  
Sbjct: 555 YLYCLTVADICATNEKTWNNWKGSLLRDLYFSTQRVLARGKEKPVDIRARVREHQGKAKK 614

Query: 649 LLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAWHARHLLQHDLSKPLVLLSPQATRGGT 708
            L    I E++L  +W R +A+YF+RH PNQ+AWHA  +L+H   + LVL+S   TRGGT
Sbjct: 615 ELLRRGIKEKSLDTLWQRFKADYFLRHQPNQVAWHAEAILKHKHDEALVLVSKHTTRGGT 674

Query: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLS-ADRH 767
           E+F++S D+P LFA V A LD +N++VHDA I T++DG A+D+F++LE DGSP+S   R 
Sbjct: 675 ELFVYSQDKPKLFATVMAVLDNKNINVHDASIMTSKDGYALDSFVILEQDGSPVSQISRI 734

Query: 768 EVIRFGLEQVLTQSSWQPPQPRRQPAKLRHFTVETEVTFLPTHTDRKSFLELIALDQPGL 827
           + I+  L + L+  + + P+ ++ P K++ F V T+V+FLP      S +ELIALD PGL
Sbjct: 735 QGIKKALVKALSNDTAKLPKFKKLPRKMKPFRVPTQVSFLPARKQGTSMMELIALDSPGL 794

Query: 828 LARVGKIFADLGISLHGARITTIGERVEDLFIIATADRRALNNELQQEVHQRLTEALNPN 887
           LA+VG IF    I+L  A+ITTIGER ED F++ T D + LN   Q+ + + L +AL+  
Sbjct: 795 LAKVGDIFYRCKITLLAAKITTIGERAEDFFMLQTQDGQQLNETQQEALSEALVKALDTQ 854

Query: 888 DK 889
           ++
Sbjct: 855 NQ 856