Pairwise Alignments

Query, 1073 a.a., carbamoyl-phosphate synthase large subunit from Escherichia coli ECRC62

Subject, 1105 a.a., carbamoyl-phosphate synthase, large subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 1282 bits (3317), Expect = 0.0
 Identities = 678/1096 (61%), Positives = 815/1096 (74%), Gaps = 44/1096 (4%)

Query: 1    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM 60
            MPKRTDIKSI+I+GAGPI+IGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRTDIKSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL 60

Query: 61   ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA 120
            ADATYIEPI  E+V KIIEKERPDA+LPTMGGQT LN +L LE  GVL ++GV MIGA  
Sbjct: 61   ADATYIEPITPEIVAKIIEKERPDALLPTMGGQTGLNTSLALEEMGVLAKYGVEMIGAKR 120

Query: 121  DAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGG 180
            +AI+ AEDR+ F  AM ++G+E  R+ IA TM+E +A   D+G P IIRP+FT+GG+GGG
Sbjct: 121  EAIEMAEDRKLFREAMDRLGIENPRATIATTMDECMAALDDIGLPAIIRPAFTLGGTGGG 180

Query: 181  IAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM 240
            +AYNR+++E  C  GLD SP  ++LIDESL+GWKE+EMEVVRDK DN IIVC+IEN D M
Sbjct: 181  VAYNRDDYEHFCKSGLDASPVNQILIDESLLGWKEFEMEVVRDKADNAIIVCAIENVDPM 240

Query: 241  GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM 300
            G+HTGDSITVAPA TLTDKEYQIMRN S+AVLREIGVETGGSNVQ+AVNP +GR++VIEM
Sbjct: 241  GVHTGDSITVAPALTLTDKEYQIMRNGSIAVLREIGVETGGSNVQWAVNPADGRMVVIEM 300

Query: 301  NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP 360
            NPRVSRSSALASKATGFPIAK+AAKLAVGYTLDEL NDIT   TPASFEP+IDYVVTKIP
Sbjct: 301  NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDIT-KVTPASFEPTIDYVVTKIP 359

Query: 361  RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFD----PKVSLD 416
            RF FEKF GA   LTT MKSVGE M+IGRT  ES+QKAL  +E G TGFD    P +S D
Sbjct: 360  RFAFEKFPGAEPNLTTAMKSVGEAMSIGRTFHESVQKALASMETGLTGFDEIAIPGISAD 419

Query: 417  ---DPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLE 473
               D      + + L     +R+  IA A R GLS D +   T+ D WFL +I E+V  E
Sbjct: 420  HRSDAPDTAAVVKALARQTPDRLRVIAQAMRHGLSDDEIQAATSYDPWFLARIREIVETE 479

Query: 474  EKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCA 533
             +V   G+  L AE LR+LK  GF DARLAKL G  E ++R+ R +  +   +KR+DTCA
Sbjct: 480  AQVRRDGLP-LEAEGLRKLKMMGFTDARLAKLTGRDEGQVRRARTRLGVTAQFKRIDTCA 538

Query: 534  AEFATDTAYMYSTY------EEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASL 587
            AEF   T YMYSTY      E ECE+ P TD  K+++LGGGPNRIGQGIEFDYCC HA  
Sbjct: 539  AEFEAQTPYMYSTYETPVMGEAECESRP-TDATKVVILGGGPNRIGQGIEFDYCCCHACF 597

Query: 588  ALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPK----GVIVQYG 643
            AL E GYETIMVNCNPETVSTDYDTSDRLYFEP+T E V+EI+R E+      GVIVQ+G
Sbjct: 598  ALTEAGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEHVMEILRAEQENGTLHGVIVQFG 657

Query: 644  GQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVE 703
            GQTPLKLA ALEA G+P++GT+PDAID AEDRERFQ  V  L LKQP NA  +    A  
Sbjct: 658  GQTPLKLANALEAEGIPILGTTPDAIDLAEDRERFQALVNDLGLKQPHNAIASTDAEAFA 717

Query: 704  KAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVD 763
             A +IG+PLV+RPSYVLGGRAMEIV D   L RY   AV VS D+PVLLD +L  AVE+D
Sbjct: 718  AAGDIGFPLVIRPSYVLGGRAMEIVRDMGQLERYIAEAVVVSGDSPVLLDSYLAGAVELD 777

Query: 764  VDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVR 823
            VDA+CDGE V + GIM+HIE+AGVHSGDSACSLP Y+LS ++   +R Q + LA  L+V+
Sbjct: 778  VDALCDGENVHVAGIMQHIEEAGVHSGDSACSLPPYSLSDDVLARIRVQTEALARALRVK 837

Query: 824  GLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEV 883
            GLMNVQFA+K++E+YLIEVNPRA+RTVPFV+KAT   +A +AAR+MAG+ L+   + ++ 
Sbjct: 838  GLMNVQFAIKDDEIYLIEVNPRASRTVPFVAKATDSAIASIAARLMAGEPLSNFPL-RDP 896

Query: 884  IP----------------------PYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVG 921
            +P                      P++SVKE VLPF +FPGVD +LGPEMRSTGEVMG  
Sbjct: 897  LPHDAPEDQHLPIGDPMTLAHPDTPWFSVKEAVLPFARFPGVDTILGPEMRSTGEVMGWD 956

Query: 922  RTFAEAFAKAQLGSNSTMKKHGRALLSVREGDK-ERVVDLAAKLLKQGFELDATHGTAIV 980
            R+F  AF KAQ+G+ + +   G   LS++E DK E +V+ AA L + G ++ AT GTA  
Sbjct: 957  RSFPRAFLKAQMGAGTVLPTEGTVFLSIKEADKTEMLVETAAMLTELGLDIVATRGTAAF 1016

Query: 981  LGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHY 1040
            L + GI  ++VNKV+EGRP + D +K+G    ++NTT G +A+ DSR IR  AL  ++ Y
Sbjct: 1017 LKDHGIASKVVNKVYEGRPDVVDMLKDGRIALVMNTTEGAQAVNDSREIRSVALYDRIPY 1076

Query: 1041 DTTLNGGFATAMALNA 1056
             TTL    A A A+ A
Sbjct: 1077 FTTLAASHAAAQAMIA 1092