Pairwise Alignments

Query, 349 a.a., nitrogen regulation protein NR(II) from Escherichia coli ECRC62

Subject, 351 a.a., signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) from Shewanella loihica PV-4

 Score =  317 bits (813), Expect = 2e-91
 Identities = 171/345 (49%), Positives = 236/345 (68%), Gaps = 8/345 (2%)

Query: 12  ILNSLINSILLIDDNLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNIELMQESLE 71
           +LN L+ ++L+I D+L + YAN AA+QLL   S +L    L +     S++ +L++ ++ 
Sbjct: 6   LLNHLVTAVLVISDDLKLCYANSAAEQLLGLGSHRLTEHNLLDCCQLLSIDHQLLRTAIR 65

Query: 72  AGQGFTDNEVTLV-IDGRSHILSVTA---QRMPDG--MILLEMAPMDNQRRLSQEQLQHA 125
             QG T N   LV +DG+ H + +T    +  PD     +LE+  +D QRR+ Q+    A
Sbjct: 66  EHQGLTVNTANLVTLDGQGHTVDMTLTPLEAQPDQPEQGVLELRQVDQQRRIHQQLTLDA 125

Query: 126 QQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALPDPSLLEYTKVIIEQADRLRNLVDRL 185
           QQ AA+ LVR LAHEIKNPLGGLRGAAQLLS+ L D    E+T +IIEQADRLRNLVDRL
Sbjct: 126 QQQAAQYLVRNLAHEIKNPLGGLRGAAQLLSRELEDADQREFTDLIIEQADRLRNLVDRL 185

Query: 186 LGPQLPGTRVTESIHKVAERVVTLVSMELPDNVRLIRDYDPSLPELAHDPDQIEQVLLNI 245
           LGPQ P      +IH V ++V+ LVS+ LP N+ LI+DYDPS+P++  D +Q++Q +LNI
Sbjct: 186 LGPQKPTEHSLHNIHAVIQKVLKLVSVTLPGNIHLIQDYDPSIPDIEMDQEQLQQAVLNI 245

Query: 246 VRNALQALG--PEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFYP 303
           V+NA+QAL    +GGEI ++TRT  Q+T+   R++L   + + D+GPGIPP L DTLFYP
Sbjct: 246 VQNAIQALETVEDGGEIRIKTRTQHQVTIGTTRHKLVLALSIIDDGPGIPPELMDTLFYP 305

Query: 304 MVSGREGGTGLGLSIARNLIDQHSGKIEFTSWPGHTEFSVYLPIR 348
           MV+GRE G+GLGLSIA N    H G+I+  S PG TEF++ LP++
Sbjct: 306 MVTGREQGSGLGLSIAHNFARLHGGRIDCASVPGKTEFTILLPLK 350