Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Escherichia coli ECRC62

Subject, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

 Score =  731 bits (1888), Expect = 0.0
 Identities = 375/469 (79%), Positives = 408/469 (86%), Gaps = 12/469 (2%)

Query: 1   VSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNIN 60
           +++SLWQQC+ RLQDEL A +FSMWIRPLQAE+   TL LYAPNRFVLDWVRDKYLN IN
Sbjct: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGETLVLYAPNRFVLDWVRDKYLNTIN 60

Query: 61  GLLTSFCGADAPQLRFEVGTKPVTQ--TPQAAVTSNVAAPAQVAQTQPQRAAPSTRSGWD 118
              T   G+DAP+LRF++G++P ++   P A+  S VA         P   +PS  S   
Sbjct: 61  QFFTEQMGSDAPKLRFDIGSRPASKPAAPAASTKSPVA---------PAAKSPSKPSFNS 111

Query: 119 NVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGK 178
           N PA A   +RSN+N  + FDNFVEGKSNQL +AAA QV++NPGGAYNPLFLYGGTGLGK
Sbjct: 112 NEPA-ATANHRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGK 170

Query: 179 THLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQ 238
           THLLHAVGNGI+   PNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDAL IDDIQ
Sbjct: 171 THLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQ 230

Query: 239 FFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPE 298
           FFANK+RSQEEFFHTFNALLEGN Q+ILTSDRYPKEI+GVEDRLKSRFGWGLTVAIEPPE
Sbjct: 231 FFANKDRSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPE 290

Query: 299 LETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDF 358
           LETRVAILM+KA E+ I LP EVAFFIAKRLRSNVRELEGALNRVIANANFTGR ITIDF
Sbjct: 291 LETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDF 350

Query: 359 VREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALAKELT 418
           VREALRDLLALQEKLVTIDNIQKTVAEYYKIK+AD+LSKRRSRSVARPRQMAMAL+KELT
Sbjct: 351 VREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELT 410

Query: 419 NHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS 467
           N SLPEIGDAFGGRDHTTVLHACRKI QLREESHDIKED++NLIRTLSS
Sbjct: 411 NQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 459