Pairwise Alignments

Query, 365 a.a., branched chain amino acid ABC transporter substrate-binding protein LivJ from Escherichia coli ECRC62

Subject, 372 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  442 bits (1136), Expect = e-129
 Identities = 211/364 (57%), Positives = 279/364 (76%), Gaps = 2/364 (0%)

Query: 4   KALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGN 63
           K  LA  +  A S    A+ I++ + G ++GPVAQYGD +F GAE A+  IN  GG+ G 
Sbjct: 9   KIFLAMALTGAASYTLAADTIRIGLAGPVTGPVAQYGDMQFIGAEMAIEQINKAGGVNGA 68

Query: 64  KLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSSSTQPASDIYEDEGILMITPAAT 123
           +L+ V+YDDACDPKQAVAVANK+VND +K+V+GHLCSSSTQPASDIYEDEGILMIT A+T
Sbjct: 69  QLKGVRYDDACDPKQAVAVANKIVNDNVKFVVGHLCSSSTQPASDIYEDEGILMITAAST 128

Query: 124 APELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQDGL 183
           +P++T+RGY+LI RT GLDS QGPTA  +I + VKP+ +A++HDKQQYGEG+A AV+  L
Sbjct: 129 SPDITSRGYELIFRTIGLDSLQGPTAGNFIADHVKPKNVAVIHDKQQYGEGIATAVKQTL 188

Query: 184 KKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQF 243
           +  N  V  F+GI AG+KDFS+L+A+LK+E +DFVYYGGYHPE+G +LRQ++  GL  +F
Sbjct: 189 EGKNIKVGLFEGINAGDKDFSSLIAKLKREGVDFVYYGGYHPELGLLLRQSKEKGLNVRF 248

Query: 244 MGPEGVANVSLSNIAGESAEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYA 303
           MGPEGV N  +S IAG ++EG+ VT PK++DQ P NK +VD  KAKKQDPSG FV+  YA
Sbjct: 249 MGPEGVGNSEISAIAGPASEGMYVTLPKSFDQDPRNKELVDGFKAKKQDPSGPFVFPAYA 308

Query: 304 ALQSLQAGLNQ--SDDPAEIAKYLKANSVDTVMGPLTWDEKGDLKGFEFGVFDWHANGTA 361
           A+Q +  G+ +  S D  ++A+ L++N+ DT  G L++DEKGDLK F F V++WH +GT 
Sbjct: 309 AVQVIAEGIEKAGSTDTDKVAEALRSNTFDTPTGMLSFDEKGDLKDFNFVVYEWHQDGTK 368

Query: 362 TDAK 365
           T+AK
Sbjct: 369 TEAK 372