Pairwise Alignments

Query, 315 a.a., methionyl-tRNA formyltransferase from Escherichia coli ECRC62

Subject, 322 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  221 bits (562), Expect = 2e-62
 Identities = 124/312 (39%), Positives = 187/312 (59%), Gaps = 10/312 (3%)

Query: 3   ESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPIKVLAEEKGLP 62
           E LRI++ GTPDFA   L  L+  G+NVVGV T PD+PAGRG K+  SP+K  A E+ LP
Sbjct: 4   EDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAGRGHKIQYSPVKQYALEQNLP 63

Query: 63  VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
           + QP  L+ +   Q + + +AD+ +VVA+ + LP+ V  MPRLG  N+H SLLP++RGAA
Sbjct: 64  LLQPEKLKDEAFVQALREWKADLQIVVAFRM-LPEVVWNMPRLGTFNLHASLLPQYRGAA 122

Query: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
           PI  ++  GD ETG+T   +   +DTG ++ ++  PI   D    ++DKL  LG + ++ 
Sbjct: 123 PINWAVINGDTETGITTFFLQHEIDTGKVIQQVRVPIADTDNVEVVHDKLMILGGKLVLE 182

Query: 183 TLKQLADGTAKPEVQDETLVT----YAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSW 238
           T+  + + T KP  Q++  V      A K+ KE  RIDW+    ++   IR  +P+P +W
Sbjct: 183 TVDAILNDTVKPIAQEDMAVVGELRPAPKIFKETCRIDWNSPVKKVYDFIRGLSPYPAAW 242

Query: 239 LEI---EGQPV--KVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKK 293
            E+   EG+ V  K++++  I  A     GT++   K+ I+VA  DG +++LSLQ  GKK
Sbjct: 243 SELVSPEGEAVVMKIFESEKIYEAHQLPVGTVVTDGKKYIKVAVPDGFVSVLSLQLPGKK 302

Query: 294 AMSAQDLLNSRR 305
            +   +LL   R
Sbjct: 303 RLKTDELLRGFR 314