Pairwise Alignments

Query, 318 a.a., DNA-binding transcriptional regulator YqhC from Escherichia coli ECRC62

Subject, 298 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (396), Expect = 4e-43
 Identities = 92/254 (36%), Positives = 148/254 (58%), Gaps = 2/254 (0%)

Query: 58  PFARTPVMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETY-ATSEVPLA 116
           P + +  + EP I ++  G K   + E+ FRYD + +L+ ++ LP + +   A+ E P  
Sbjct: 42  PTSCSVCVVEPSIALVVQGAKAMTLGEQTFRYDPSRFLITSLDLPAKMQVLEASEEAPYL 101

Query: 117 GVRLNVDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDAR 176
           GV + +D+  + +L++        + +     I  AT + ++L A  RL+++++ P    
Sbjct: 102 GVVIKLDLAVMSDLMLQTPLTMQKETASDQGMILGAT-TPKLLGAISRLVNLLDEPESIA 160

Query: 177 ILGKQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEA 236
           +L   I REI + VL    G  L  +VS  +H   I+R ++ ++  Y ++LSV+ LA  A
Sbjct: 161 VLAPLIKREIYWRVLMSEQGARLRQIVSAGSHGLRIARTIEWLKVHYDQHLSVDSLADMA 220

Query: 237 NMSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSRE 296
            MS S FHH+F+ +TS SPLQY K  RL +AR +++ + + ASAAA RVGYES SQFSRE
Sbjct: 221 RMSKSTFHHHFRRLTSMSPLQYQKRLRLLEARRLMLGEDIDASAAAYRVGYESPSQFSRE 280

Query: 297 FKRYFGVTPGEDAA 310
           + R FG +P +D A
Sbjct: 281 YSRLFGASPKKDVA 294