Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptF from Escherichia coli ECRC62

Subject, 380 a.a., permease YjgP/YjgQ family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 53.9 bits (128), Expect = 7e-12
 Identities = 60/220 (27%), Positives = 94/220 (42%), Gaps = 28/220 (12%)

Query: 14  RLVLIIVGFLIFIFASYSAQRY--LTEAANGT---LALDVVLDIVFYKVLIALEMLLPVG 68
           RL++    F + I   Y   R   L E  +G    LAL   L ++    LI L  +LP+ 
Sbjct: 12  RLMVTFGFFTLIIVLIYWINRSIRLFERLSGDGQGLALFAQLSLLSLPYLIYL--MLPLA 69

Query: 69  LYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMYGRPWAYTQ 128
            + S   T  +M +DSE  A+ AAG S  R+ +  LY+ +  +  + LL+    P +   
Sbjct: 70  AFASAVSTGNRMGSDSETVALQAAGISAFRIVRPALYMGVMAAALMLLLAHLLVPMSRVA 129

Query: 129 IYQLEQQSQSELDVRQLRAKKFNT----------NDNGRMILSQTVDQDNNRLTDALIYT 178
           I  LE+Q   E+  R L   KF +             G  +LS+ +  D     + +IY 
Sbjct: 130 IADLEEQLADEVSARLLEPGKFQSPIDGVTVFVAEITGEGVLSKVLLSDQRDPAEEVIY- 188

Query: 179 STANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQG 218
            TAN+  + R         S   P +++ +G A  L   G
Sbjct: 189 -TANQALLVR---------SDTGPQLVMISGLAQFLRADG 218