Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptF from Escherichia coli ECRC62

Subject, 370 a.a., permease YjgP/YjgQ family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  125 bits (315), Expect = 1e-33
 Identities = 93/365 (25%), Positives = 178/365 (48%), Gaps = 18/365 (4%)

Query: 3   LVEHYIMRGTRRLVLIIVGFLIFIFASYSAQRYLTEAANGTLALDVVLDIVFYKVLIALE 62
           +V  Y++R   +  + ++  L+ IF S    R L +A++G     ++  ++   +   + 
Sbjct: 2   IVFRYLIREVLKAQIAVLFVLLTIFISQHFVRILADASDGEFPASLIATLIGLNLPYLVV 61

Query: 63  MLLPVGLYVSVGVTLGQMYTDSEITAISAAGGSPGRLYKAVLYLAIPLSIFVTLLSMYGR 122
           ++LP+ L++ + +  G+MY ++E+  +   G S   + +  L LA+   +F   LS+Y  
Sbjct: 62  LVLPLSLFLGILMAHGRMYAENEMVILHGVGVSEWYVTRVTLILAVINMLFTGYLSLYVA 121

Query: 123 PWAYTQIYQLEQQSQSELDVRQLRAKKFNTNDNGRMIL-SQTVDQDNN-------RLTDA 174
           PWA  Q  Q+ +++QSE  +  L   +F  + NGR +L  + + +DN+       +L D 
Sbjct: 122 PWAEEQQNQVLEKAQSEAGLAALVQGRFQASPNGRAVLFVERIGKDNDLDKVFVAQLPDP 181

Query: 175 LIYTSTANRTRIFRARSVDVVDPSPEKPTVMLHNGTAYLLDHQGRDDNEQIYRNLQLHLN 234
                    T +  A+   V++       + L++G  Y    Q +D     +   ++ + 
Sbjct: 182 ---NDEIGLTNVVVAKGGRVLEDQNGSQQLQLNDGVRYQGSPQQKDYQMIEFGGYKMQIK 238

Query: 235 PLDQSPNVKRK---AKSVTELARSAFPADHAELQWRQSRGLTALLMALLAISLSRVKPRQ 291
             +Q  + +R+   A  +TEL +   P   AE  WR +  L   +M L+A+ L+RV  RQ
Sbjct: 239 --EQQVDERRRKLSALPLTELMKVEGPEAVAEFHWRLAIPLAIPIMTLIAVPLARVNVRQ 296

Query: 292 GRFSTLLPLTLLFIAIFYGGDVCRTLVANGAIPLIPGLWLVP-GLMLMGLLMLVARDFSL 350
           G+F+ +LP  LL++  F      R  + +G IP   G+W +    ++MG+L+L  +D  L
Sbjct: 297 GKFAKMLPAVLLYLGYFGLMVAGRKALQDGVIPQYLGMWWIHLSALIMGILLL-GKDRPL 355

Query: 351 LQKFS 355
             + S
Sbjct: 356 FARLS 360